RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 C19orf48Q6RUI8 117 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 OOSP2Q86WS3 158 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 ZFAND4Q86XD8 727 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 FAM129CQ86XR2 697 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 ADGRF3Q8IZF5 1079 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 OTUD6BQ8N6M0 293 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.3■□□□□ 0.041e-6■■■■□ 25.2
RPS28-203ENST00000600659 OR4E2Q8NGC2 313 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 GIMAP7Q8NHV1 300 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 FLVCR1-AS1Q8TAF5 88 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 KCNE4Q8WWG9 221 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 ASZ1Q8WWH4 475 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 ZDHHC12Q96GR4 267 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 PANX3Q96QZ0 392 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 SLC30A3Q99726 388 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 DDA1Q9BW61 102 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 XKR8Q9H6D3 395 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 FBXO6Q9NRD1 293 aaPredicted RBP15.3■□□□□ 0.04
RPS28-203ENST00000600659 HRASLS2Q9NWW9 162 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 GRHL1Q9NZI5 618 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 AKAP7Q9P0M2 348 aaPredicted RBP15.3■□□□□ 0.04
RPS28-203ENST00000600659 POMT2Q9UKY4 750 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 SNX24Q9Y343 169 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 SMG1Q96Q15 3661 aaKnown RBP15.29■□□□□ 0.04
RPS28-203ENST00000600659 FAM187AA6NFU0 413 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 TLCD2A6NGC4 264 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 SMAPO00193 183 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 PKMP14618 531 aaKnown RBP15.29■□□□□ 0.04
RPS28-203ENST00000600659 NELFEP18615 380 aaKnown RBP15.29■□□□□ 0.04
RPS28-203ENST00000600659 GABRB3P28472 473 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 ELK3P41970 407 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 ABCG1P45844 678 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 SRSF6Q13247 344 aaKnown RBP15.29■□□□□ 0.04
RPS28-203ENST00000600659 FASTKD3Q14CZ7 662 aaKnown RBP15.29■□□□□ 0.04
RPS28-203ENST00000600659 TGIF1Q15583 401 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 HSP90AA5PQ58FG0 334 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 DNAJC21Q5F1R6 531 aaKnown RBP15.29■□□□□ 0.04
RPS28-203ENST00000600659 CACHD1Q5VU97 1274 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 DUPD1Q68J44 220 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 FBXO38Q6PIJ6 1188 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 UNC5AQ6ZN44 842 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 SDCCAG8Q86SQ7 713 aaPredicted RBP15.29■□□□□ 0.04
RPS28-203ENST00000600659 KCNMB4Q86W47 210 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 CNTN4Q8IWV2 1026 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 TBC1D21Q8IYX1 336 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 LCN9Q8WX39 176 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 CD180Q99467 661 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 ERP44Q9BS26 406 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 FBXO8Q9NRD0 319 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 LATS2Q9NRM7 1088 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 C20orf96Q9NUD7 363 aaPredicted RBP15.29■□□□□ 0.04
RPS28-203ENST00000600659 SLC39A1Q9NY26 324 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 SLC17A6Q9P2U8 582 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 CDC23Q9UJX2 597 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 CHMP2BQ9UQN3 213 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 ASF1AQ9Y294 204 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 NFS1Q9Y697 457 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 NBEAQ8NFP9 2946 aa15.29■□□□□ 0.04
RPS28-203ENST00000600659 FER1L5A0AVI2 2057 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 F8W8V4 182 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 RASSF9O75901 435 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 APOA4P06727 396 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 ERVK-10P10266 1014 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 LIPCP11150 499 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 POLR2CP19387 275 aaPredicted RBP15.28■□□□□ 0.04
RPS28-203ENST00000600659 PEBP1P30086 187 aaKnown RBP15.28■□□□□ 0.04
RPS28-203ENST00000600659 CLCN7P51798 805 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 TIAL1Q01085 375 aaKnown RBP eCLIP15.28■□□□□ 0.04
RPS28-203ENST00000600659 THOC5Q13769 683 aaKnown RBP15.28■□□□□ 0.04
RPS28-203ENST00000600659 HIF1AQ16665 826 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 SPANXN3Q5MJ09 141 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 HP1BP3Q5SSJ5 553 aaPredicted RBP15.28■□□□□ 0.04
RPS28-203ENST00000600659 PLEKHS1Q5SXH7 462 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 TRMT10BQ6PF06 316 aaKnown RBP15.28■□□□□ 0.04
RPS28-203ENST00000600659 KLHL35Q6PF15 583 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 LMNTD2Q8IXW0 634 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 PDIK1LQ8N165 341 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 C2CD4AQ8NCU7 369 aaPredicted RBP15.28■□□□□ 0.04
RPS28-203ENST00000600659 FAM136AQ96C01 138 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 CTRCQ99895 268 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 TSSK1BQ9BXA7 367 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 PITPNM3Q9BZ71 974 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 TRIT1Q9H3H1 467 aaKnown RBP15.28■□□□□ 0.04
RPS28-203ENST00000600659 FBXO5Q9UKT4 447 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 PLAGL1Q9UM63 463 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 RUVBL2Q9Y230 463 aaKnown RBP15.28■□□□□ 0.04
RPS28-203ENST00000600659 CACNA1GO43497 2377 aa15.28■□□□□ 0.04
RPS28-203ENST00000600659 KRT87PA6NCN2 255 aa15.27■□□□□ 0.04
RPS28-203ENST00000600659 RRP8O43159 456 aaKnown RBP15.27■□□□□ 0.04
RPS28-203ENST00000600659 EFSO43281 561 aa15.27■□□□□ 0.04
RPS28-203ENST00000600659 HAUS5O94927 633 aa15.27■□□□□ 0.04
RPS28-203ENST00000600659 TTC4O95801 387 aa15.27■□□□□ 0.04
RPS28-203ENST00000600659 CD82P27701 267 aa15.27■□□□□ 0.04
RPS28-203ENST00000600659 PKLRP30613 574 aa15.27■□□□□ 0.04
RPS28-203ENST00000600659 RAB15P59190 212 aa15.27■□□□□ 0.04
RPS28-203ENST00000600659 KRT33BQ14525 404 aa15.27■□□□□ 0.04
RPS28-203ENST00000600659 KCNAB1Q14722 419 aa15.27■□□□□ 0.04
RPS28-203ENST00000600659 TRADDQ15628 312 aa15.27■□□□□ 0.04
RPS28-203ENST00000600659 DNTTIP2Q5QJE6 756 aaKnown RBP15.27■□□□□ 0.04
RPS28-203ENST00000600659 ZNF449Q6P9G9 518 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms