RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 COPS4Q9BT78 406 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 TDRD1Q9BXT4 1180 aaKnown RBP10.39□□□□□ -0.75
RNF43-207ENST00000583753 ADGRE3Q9BY15 652 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 MAF1Q9H063 256 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 ABCB9Q9NP78 766 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 INIPQ9NRY2 104 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 RAPGEFL1Q9UHV5 662 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 ASB1Q9Y576 335 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 SPO11Q9Y5K1 396 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 MYO7AQ13402 2215 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 LOC110117498-PIK3R3F6TDL0 507 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 TULP3O75386 442 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 CREG1O75629 220 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 PGRP06401 933 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 DCKP27707 260 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 TTPAP49638 278 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 ZNF135P52742 658 aaPredicted RBP10.39□□□□□ -0.75
RNF43-207ENST00000583753 DUSP4Q13115 394 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 TOP3AQ13472 1001 aaPredicted RBP10.39□□□□□ -0.75
RNF43-207ENST00000583753 TAF1CQ15572 869 aaPredicted RBP10.39□□□□□ -0.75
RNF43-207ENST00000583753 FAM214AQ32MH5 1076 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 UGT3A2Q3SY77 523 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 RNF219Q5W0B1 726 aaPredicted RBP10.39□□□□□ -0.75
RNF43-207ENST00000583753 OR4F3Q6IEY1 312 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 Q6ZPB1 254 aaPredicted RBP10.39□□□□□ -0.75
RNF43-207ENST00000583753 PIANPQ8IYJ0 282 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 AMER2Q8N7J2 671 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 NLGN2Q8NFZ4 835 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 OR2T11Q8NH01 316 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 GTPBP3Q969Y2 492 aaKnown RBP10.39□□□□□ -0.75
RNF43-207ENST00000583753 ISL2Q96A47 359 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 IMP4Q96G21 291 aaKnown RBP10.39□□□□□ -0.75
RNF43-207ENST00000583753 ZNF419Q96HQ0 510 aaPredicted RBP10.39□□□□□ -0.75
RNF43-207ENST00000583753 CCSER2Q9H7U1 834 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 KAT8Q9H7Z6 458 aaKnown RBP10.39□□□□□ -0.75
RNF43-207ENST00000583753 ADARB2Q9NS39 739 aaKnown RBP10.39□□□□□ -0.75
RNF43-207ENST00000583753 GKN1Q9NS71 199 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 TMEM9Q9P0T7 183 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 LRFN2Q9ULH4 789 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 GPR45Q9Y5Y3 372 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 COL2A1P02458 1487 aaPredicted RBP10.39□□□□□ -0.75
RNF43-207ENST00000583753 H3BN98 237 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 B3GALT4O96024 378 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 ENO2P09104 434 aaPredicted RBP10.39□□□□□ -0.75
RNF43-207ENST00000583753 ZNF7P17097 686 aaPredicted RBP10.39□□□□□ -0.75
RNF43-207ENST00000583753 PFKLP17858 780 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 CRHBPP24387 322 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 GKP32189 559 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 SLC11A2P49281 568 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 MS4A13Q5J8X5 152 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 RBM48Q5RL73 367 aaKnown RBP10.39□□□□□ -0.75
RNF43-207ENST00000583753 ZNF648Q5T619 568 aaPredicted RBP10.39□□□□□ -0.75
RNF43-207ENST00000583753 C11orf96Q7Z7L8 435 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 SCAIQ8N9R8 606 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 SLC22A17Q8WUG5 538 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 ZNF385DQ9H6B1 395 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 TEKT2Q9UIF3 430 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 PRKAB1Q9Y478 270 aa10.39□□□□□ -0.75
RNF43-207ENST00000583753 DNMT3AQ9Y6K1 912 aaPredicted RBP10.39□□□□□ -0.75
RNF43-207ENST00000583753 PTPRFP10586 1907 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 PRMT5O14744 637 aaPredicted RBP10.38□□□□□ -0.75
RNF43-207ENST00000583753 TNFRSF1BP20333 461 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 SCAPQ12770 1279 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 ILF2Q12905 390 aaKnown RBP10.38□□□□□ -0.75
RNF43-207ENST00000583753 CSTF3Q12996 717 aaKnown RBP10.38□□□□□ -0.75
RNF43-207ENST00000583753 CDH18Q13634 790 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 SF1Q15637 639 aaKnown RBP10.38□□□□□ -0.75
RNF43-207ENST00000583753 KCNJ8Q15842 424 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 MSANTD2Q6P1R3 559 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 SPATC1Q76KD6 591 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 GOLGA7Q7Z5G4 137 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 MON1AQ86VX9 555 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 NPLOC4Q8TAT6 608 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 PROKR1Q8TCW9 393 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 LGALS12Q96DT0 336 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 MTERF3Q96E29 417 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 MTERF1Q99551 399 aaKnown RBP10.38□□□□□ -0.75
RNF43-207ENST00000583753 TLR8Q9NR97 1041 aaKnown RBP10.38□□□□□ -0.75
RNF43-207ENST00000583753 PADI3Q9ULW8 664 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 VPS9D1Q9Y2B5 631 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 FCF1Q9Y324 198 aaKnown RBP10.38□□□□□ -0.75
RNF43-207ENST00000583753 PCDHB5Q9Y5E4 795 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 ARID1BQ8NFD5 2236 aaPredicted RBP10.38□□□□□ -0.75
RNF43-207ENST00000583753 EFCAB10A6NFE3 127 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 LOC730098B7Z3J9 87 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 GABRDO14764 452 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 FFAR2O15552 330 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 EPN2O95208 641 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 FAM163BP0C2L3 166 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 KCNE1P15382 129 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 ITGALP20701 1170 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 XPAP23025 273 aaPredicted RBP10.38□□□□□ -0.75
RNF43-207ENST00000583753 PAX3P23760 479 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 HRH2P25021 359 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 SOX6P35712 828 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 MRPS6P82932 125 aaKnown RBP10.38□□□□□ -0.75
RNF43-207ENST00000583753 SMARCB1Q12824 385 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 UBE2UQ5VVX9 321 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 PM20D1Q6GTS8 502 aa10.38□□□□□ -0.75
RNF43-207ENST00000583753 CADM3Q8N126 398 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 922.7 ms