RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 MCEMP1Q8IX19 187 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 BMPERQ8N8U9 685 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 RNF128Q8TEB7 428 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 ZNRF4Q8WWF5 429 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 ERLEC1Q96DZ1 483 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 TAS2R14Q9NYV8 317 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 EXO1Q9UQ84 846 aaKnown RBP3.5□□□□□ -1.85
COPS3-217ENST00000583160 ASTN2O75129 1339 aaPredicted RBP3.49□□□□□ -1.85
COPS3-217ENST00000583160 COL5A2P05997 1499 aaPredicted RBP3.49□□□□□ -1.85
COPS3-217ENST00000583160 LOC101059948A0A1B0GTJ6 334 aa3.49□□□□□ -1.85
COPS3-217ENST00000583160 A0A1W2PN81 502 aa3.49□□□□□ -1.85
COPS3-217ENST00000583160 DUS4LO95620 317 aaKnown RBP3.49□□□□□ -1.85
COPS3-217ENST00000583160 PRLRP16471 622 aa3.49□□□□□ -1.85
COPS3-217ENST00000583160 CHRNA7P36544 502 aa3.49□□□□□ -1.85
COPS3-217ENST00000583160 PRKCZQ05513 592 aa3.49□□□□□ -1.85
COPS3-217ENST00000583160 TAF13Q15543 124 aa3.49□□□□□ -1.85
COPS3-217ENST00000583160 FAM98BQ52LJ0 330 aaKnown RBP3.49□□□□□ -1.85
COPS3-217ENST00000583160 MDH1BQ5I0G3 518 aa3.49□□□□□ -1.85
COPS3-217ENST00000583160 GRTP1Q5TC63 336 aa3.49□□□□□ -1.85
COPS3-217ENST00000583160 DOK6Q6PKX4 331 aa3.49□□□□□ -1.85
COPS3-217ENST00000583160 MAPKAPK5-AS1Q8N8E1 139 aa3.49□□□□□ -1.85
COPS3-217ENST00000583160 OR4C3Q8NH37 302 aa3.49□□□□□ -1.85
COPS3-217ENST00000583160 FTOQ9C0B1 505 aaKnown RBP eCLIP3.49□□□□□ -1.85
COPS3-217ENST00000583160 VN1R1Q9GZP7 353 aa3.49□□□□□ -1.85
COPS3-217ENST00000583160 CHMP1AQ9HD42 196 aaPredicted RBP3.49□□□□□ -1.85
COPS3-217ENST00000583160 A4GALTQ9NPC4 353 aa3.49□□□□□ -1.85
COPS3-217ENST00000583160 KRT84Q9NSB2 600 aa3.49□□□□□ -1.85
COPS3-217ENST00000583160 OSGIN1Q9UJX0 560 aa3.49□□□□□ -1.85
COPS3-217ENST00000583160 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.49□□□□□ -1.85
COPS3-217ENST00000583160 AQRO60306 1485 aaKnown RBP eCLIP3.48□□□□□ -1.85
COPS3-217ENST00000583160 ARAP1Q96P48 1450 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 SOGA1O94964 1423 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 A0A087X0M5 115 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 A0A1B0GX30 115 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 KLF11O14901 512 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 SSX4O60224 188 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 KHDRBS3O75525 346 aaKnown RBP3.48□□□□□ -1.85
COPS3-217ENST00000583160 MBD4O95243 580 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 SCGB1D1O95968 90 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 CA4P22748 312 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 MAPK4P31152 587 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 SUOXP51687 545 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 SGSM1Q2NKQ1 1148 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 SNAI3Q3KNW1 292 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 SUSD1Q6UWL2 747 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 LSMEM2Q8N112 164 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 PPFIBP2Q8ND30 876 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 OR6C1Q96RD1 312 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 PKP2Q99959 881 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 C16orf70Q9BSU1 422 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 CLEC7AQ9BXN2 247 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 PPIL3Q9H2H8 161 aaKnown RBP3.48□□□□□ -1.85
COPS3-217ENST00000583160 ARRDC1-AS1Q9H2J1 176 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 SEPT11Q9NVA2 429 aaKnown RBP3.48□□□□□ -1.85
COPS3-217ENST00000583160 TAB2Q9NYJ8 693 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 RHCGQ9UBD6 479 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 CUX1P39880 1505 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 ABCA10Q8WWZ4 1543 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 ABCA5Q8WWZ7 1642 aa3.48□□□□□ -1.85
COPS3-217ENST00000583160 SYNJ2O15056 1496 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 GRIN2BQ13224 1484 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 CDRT15L2A8MXV6 281 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 USO1O60763 962 aaKnown RBP3.47□□□□□ -1.85
COPS3-217ENST00000583160 GPIP06744 558 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 ACADMP11310 421 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 MMP9P14780 707 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 GATA1P15976 413 aaPredicted RBP3.47□□□□□ -1.85
COPS3-217ENST00000583160 TM4SF1P30408 202 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 CSRP3P50461 194 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 B3GALT5-AS1P59052 145 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 CX3CL1P78423 397 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 DMPKQ09013 629 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 ENPP2Q13822 863 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 ZNF239Q16600 458 aaKnown RBP3.47□□□□□ -1.85
COPS3-217ENST00000583160 HSP90AB4PQ58FF6 505 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 P2RY8Q86VZ1 359 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 FAM114A1Q8IWE2 563 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 RAB42Q8N4Z0 105 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 DCLK2Q8N568 766 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 DYRK2Q92630 601 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 LRRC59Q96AG4 307 aaKnown RBP3.47□□□□□ -1.85
COPS3-217ENST00000583160 CEP295NLQ96MC4 621 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 FUCA2Q9BTY2 467 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 HRH4Q9H3N8 390 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 MYH16Q9H6N6 1097 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 SDR39U1Q9NRG7 319 aaPredicted RBP3.47□□□□□ -1.85
COPS3-217ENST00000583160 SLC7A10Q9NS82 523 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 LARSQ9P2J5 1176 aaKnown RBP3.47□□□□□ -1.85
COPS3-217ENST00000583160 LRWD1Q9UFC0 647 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 ZDHHC2Q9UIJ5 367 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 FGD5Q6ZNL6 1462 aa3.47□□□□□ -1.85
COPS3-217ENST00000583160 SYNJ1O43426 1573 aa3.46□□□□□ -1.85
COPS3-217ENST00000583160 CCDC189A1A4V9 331 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 PI4KAP2A4QPH2 592 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 PGPEP1LA6NFU8 196 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 SERINC4A6NH21 518 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 MSGN1A6NI15 193 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 LRRC72A6NJI9 287 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 GAPDHSO14556 408 aaPredicted RBP3.46□□□□□ -1.86
COPS3-217ENST00000583160 MITFO75030 526 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms