RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 CLCNKAP51800 687 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 ARFIP2P53365 341 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 ALDH18A1P54886 795 aaKnown RBP6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 KIAA1024LP59773 190 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 YBX1P67809 324 aaKnown RBP6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 GSTM4Q03013 218 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 CLCQ05315 142 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 BTKQ06187 659 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 CCDC15Q0P6D6 951 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 ILF2Q12905 390 aaKnown RBP6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 TRAF3Q13114 568 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 EIF2B5Q13144 721 aaKnown RBP6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 PRKG2Q13237 762 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 TSTA3Q13630 321 aaPredicted RBP6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 COL9A2Q14055 689 aaPredicted RBP6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 UBAP2LQ14157 1087 aaKnown RBP6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 FASTKQ14296 549 aaKnown RBP6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 GRB7Q14451 532 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 NFATC4Q14934 902 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 PTCHD3Q3KNS1 767 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 PYCR3Q53H96 274 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 PRAMEF14Q5SWL7 426 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 ANKS6Q68DC2 871 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 LETMD1Q6P1Q0 360 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 RAB44Q7Z6P3 723 aaPredicted RBP6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 MTDHQ86UE4 582 aaKnown RBP6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 PDZD3Q86UT5 571 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 AMZ2Q86W34 360 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 NRROSQ86YC3 692 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 GALNT13Q8IUC8 556 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 HID1Q8IV36 788 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 SLC22A9Q8IVM8 553 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 UBALD2Q8IYN6 164 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 SYNPOQ8N3V7 929 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 RNF175Q8N4F7 328 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 SPEM1Q8N4L4 309 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 OXR1Q8N573 874 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 FITM2Q8N6M3 262 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 OR56A4Q8NGH8 313 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 OR2L2Q8NH16 312 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 AGAP11Q8TF27 550 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 UBTD2Q8WUN7 234 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 ASZ1Q8WWH4 475 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 ASB12Q8WXK4 309 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 LINC00615Q96LM1 132 aaPredicted RBP6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 C3orf30Q96M34 536 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 OR2M4Q96R27 311 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 INSM2Q96T92 566 aaPredicted RBP6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 HBEGFQ99075 208 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 NMUR2Q9GZQ4 415 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 TMEM168Q9H0V1 697 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 TUBB1Q9H4B7 451 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 XKR8Q9H6D3 395 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 NOL11Q9H8H0 719 aaKnown RBP6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 PARVBQ9HBI1 364 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 MID1IP1Q9NPA3 183 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 ARL15Q9NXU5 204 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 STOX2Q9P2F5 926 aaPredicted RBP6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 HEY2Q9UBP5 337 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 HAO1Q9UJM8 370 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 TRIM33Q9UPN9 1127 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 ZBTB32Q9Y2Y4 487 aaPredicted RBP6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 SIT1Q9Y3P8 196 aa6□□□□□ -1.45
RNU4ATAC-201ENST00000580972 ATXN2Q99700 1313 aaKnown RBP5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 F5P12259 2224 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 ATP6AP2A0A1C7CYW4 349 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 CCT8L1PA6NM43 557 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 MATN2O00339 956 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 LIN7AO14910 233 aaPredicted RBP5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 PIP5K1BO14986 540 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 KMOO15229 486 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 ATP6AP2O75787 350 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 WDR47O94967 919 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 TGDSO95455 350 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 SLC16A8O95907 504 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 C8GP07360 202 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 LINC00032P0C843 101 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 ALOX15P16050 662 aaPredicted RBP5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 CD22P20273 847 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 IMPA1P29218 277 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 CXCL12P48061 93 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 SLC6A12P48065 614 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 RPIAP49247 311 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 RPL14P50914 215 aaKnown RBP5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 HNRNPH2P55795 449 aaKnown RBP5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 SRP54P61011 504 aaKnown RBP5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 CTBSQ01459 385 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 RPL6Q02878 288 aaKnown RBP5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 LCP2Q13094 533 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 PRKAA1Q13131 559 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 SP140Q13342 867 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 C1orf61Q13536 156 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 NAE1Q13564 534 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 GTF2H2Q13888 395 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 FZD2Q14332 565 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 CLCA4Q14CN2 919 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 PCBP2Q15366 365 aaKnown RBP eCLIP5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 UGT3A2Q3SY77 523 aa5.99□□□□□ -1.45
RNU4ATAC-201ENST00000580972 SGO1Q5FBB7 561 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms