RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 CYBAP13498 195 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 POU1F1P28069 291 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 HCAR3P49019 387 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 RGS4P49798 205 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 TPTEP56180 551 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 OCA2Q04671 838 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 MTA1Q13330 715 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 PCBP1Q15365 356 aaKnown RBP eCLIP8.38□□□□□ -1.07
RPAIN-215ENST00000575112 FAM174BQ3ZCQ3 159 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 PAGE2BQ5JRK9 111 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 ADGRG2Q8IZP9 1017 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 KRTCAP2Q8N6L1 136 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 TRPV3Q8NET8 790 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 CNIH3Q8TBE1 160 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 DPF3Q92784 378 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 UBE2FQ969M7 185 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 TMEM125Q96AQ2 219 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 FKBP10Q96AY3 582 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 BIRC7Q96CA5 298 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 TDRD1Q9BXT4 1180 aaKnown RBP8.38□□□□□ -1.07
RPAIN-215ENST00000575112 AMBRA1Q9C0C7 1298 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 KLHL25Q9H0H3 589 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 SLC52A3Q9NQ40 469 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 POLG2Q9UHN1 485 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 WDR37Q9Y2I8 494 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 PCM1Q15154 2024 aa8.38□□□□□ -1.07
RPAIN-215ENST00000575112 BRWD1Q9NSI6 2320 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 A0A1W2PQ45 241 aaPredicted RBP8.37□□□□□ -1.07
RPAIN-215ENST00000575112 A0A1W2PQY0 241 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 LDB2O43679 373 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 ZNF37AP17032 561 aaPredicted RBP8.37□□□□□ -1.07
RPAIN-215ENST00000575112 ITGALP20701 1170 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 SCNN1AP37088 669 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 ZFP36L2P47974 494 aaKnown RBP8.37□□□□□ -1.07
RPAIN-215ENST00000575112 ADARB1P78563 741 aaKnown RBP8.37□□□□□ -1.07
RPAIN-215ENST00000575112 ZXDBP98169 803 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 CAP1Q01518 475 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 TLE2Q04725 743 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 SCAPQ12770 1279 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 RAB41Q5JT25 222 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 INTS11Q5TA45 600 aaKnown RBP8.37□□□□□ -1.07
RPAIN-215ENST00000575112 GLYATQ6IB77 296 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 SPRED1Q7Z699 444 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 TMEM179BQ7Z7N9 219 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 PHYKPLQ8IUZ5 450 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 SPARTQ8N0X7 666 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 WRAP53Q9BUR4 548 aaKnown RBP8.37□□□□□ -1.07
RPAIN-215ENST00000575112 ZFYVE1Q9HBF4 777 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 RASSF1Q9NS23 344 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 ABCB8Q9NUT2 735 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 PKD2L2Q9NZM6 624 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 OPTCQ9UBM4 332 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 PCDHA9Q9Y5H5 950 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 TSC2P49815 1807 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 GNG14A0A1W2PPG7 69 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 ANKRD66B4E2M5 251 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 H0YJX3 145 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 PER2O15055 1255 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 SLC7A4O43246 635 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 NPHS1O60500 1241 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 PABPC1P11940 636 aaKnown RBP8.37□□□□□ -1.07
RPAIN-215ENST00000575112 HLA-DPA1P20036 260 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 JAK1P23458 1154 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 SEPHS1P49903 392 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 HERVK_113P63132 956 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 KCNC4Q03721 635 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 CHRNB3Q05901 458 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 IL10RBQ08334 325 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 CHRNA6Q15825 494 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 NIPAL1Q6NVV3 410 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 CRTC3Q6UUV7 619 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 KDELC1Q6UW63 502 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 ENPP6Q6UWR7 440 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 BHLHA9Q7RTU4 235 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 SYVN1Q86TM6 617 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 ITFG1Q8TB96 612 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 TMBIM1Q969X1 311 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 CAPNS2Q96L46 248 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 BARD1Q99728 777 aaKnown RBP8.37□□□□□ -1.07
RPAIN-215ENST00000575112 ERVK-6Q9BXR3 956 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 TOR3AQ9H497 397 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 ATP13A3Q9H7F0 1226 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 HECAQ9UBI9 543 aaPredicted RBP8.37□□□□□ -1.07
RPAIN-215ENST00000575112 LSM7Q9UK45 103 aaKnown RBP8.37□□□□□ -1.07
RPAIN-215ENST00000575112 SCML2Q9UQR0 700 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 PCDHGA11Q9Y5H2 935 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 NYNRINQ9P2P1 1898 aaKnown RBP8.37□□□□□ -1.07
RPAIN-215ENST00000575112 PSME4Q14997 1843 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 PSMD11O00231 422 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 SEC24AO95486 1093 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 CYBBP04839 570 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 CD1DP15813 335 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 SELPP16109 830 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 EPHB3P54753 998 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 AIF1P55008 147 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 GP2P55259 537 aaKnown RBP8.37□□□□□ -1.07
RPAIN-215ENST00000575112 TIAL1Q01085 375 aaKnown RBP eCLIP8.37□□□□□ -1.072e-6■■■■□ 23
RPAIN-215ENST00000575112 SELENBP1Q13228 472 aa8.37□□□□□ -1.07
RPAIN-215ENST00000575112 SMN1Q16637 294 aaKnown RBP8.37□□□□□ -1.07
RPAIN-215ENST00000575112 DEFB115Q30KQ5 88 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms