RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 ARNTP27540 789 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 TBR1Q16650 682 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 TMTC4Q5T4D3 741 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 ANKRD22Q5VYY1 191 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 PWWP2BQ6NUJ5 590 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 CAND1Q86VP6 1230 aaKnown RBP19.69■□□□□ 0.74
CLK3-225ENST00000569063 SLC22A15Q8IZD6 547 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 ADGRF3Q8IZF5 1079 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 ZNF843Q8N446 348 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 GALNT6Q8NCL4 622 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 MCUQ8NE86 351 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 OR5K2Q8NHB8 316 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 ASZ1Q8WWH4 475 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 CPT1BQ92523 772 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 EXTL1Q92935 676 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 STAMBPL1Q96FJ0 436 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 MED8Q96G25 268 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 PITPNM3Q9BZ71 974 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 P2RY12Q9H244 342 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 XKR8Q9H6D3 395 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 ICKQ9UPZ9 632 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 CDYLQ9Y232 598 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 RPS6KL1Q9Y6S9 549 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 SLC9B1P1A6NJY1 282 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 IQCF5A8MTL0 148 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 C2orf74A8MZ97 194 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 VAPBO95292 243 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 TIAF1O95411 115 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 MT-ND3P03897 115 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 MLNP12872 115 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 ITGB6P18564 788 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 AOAHP28039 575 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 SHMT2P34897 504 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 TERF1P54274 439 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 HSPA14Q0VDF9 509 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 DNAJC21Q5F1R6 531 aaKnown RBP19.68■□□□□ 0.74
CLK3-225ENST00000569063 FBXO38Q6PIJ6 1188 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 LRRC6Q86X45 466 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 OR8K5Q8NH50 307 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 LKAAEAR1Q8TD35 194 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 ZNF501Q96CX3 271 aaPredicted RBP19.68■□□□□ 0.74
CLK3-225ENST00000569063 PDLIM2Q96JY6 352 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 SEMA4CQ9C0C4 833 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 TWSG1Q9GZX9 223 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 ACTR10Q9NZ32 417 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 IL17BQ9UHF5 180 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 LNPEPQ9UIQ6 1025 aa19.68■□□□□ 0.74
CLK3-225ENST00000569063 PHF2O75151 1096 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 NDUFS3O75489 264 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 TMEM63AO94886 807 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 SLCO2B1O94956 709 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 APOA4P06727 396 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 CCNYL3P0C7X3 344 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 MSL3P1P0C860 447 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 TPBGLP0DKB5 382 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 RPS3P23396 243 aaKnown RBP eCLIP19.67■□□□□ 0.74
CLK3-225ENST00000569063 FNTAP49354 379 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 GPR19Q15760 415 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 CRTC2Q53ET0 693 aaPredicted RBP19.67■□□□□ 0.74
CLK3-225ENST00000569063 PTRHD1Q6GMV3 140 aaKnown RBP19.67■□□□□ 0.74
CLK3-225ENST00000569063 MRNIPQ6NTE8 343 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 CES3Q6UWW8 571 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 UNC5AQ6ZN44 842 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 VRK3Q8IV63 474 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 EXD3Q8N9H8 876 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 GRK7Q8WTQ7 553 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 ANP32BQ92688 251 aaKnown RBP19.67■□□□□ 0.74
CLK3-225ENST00000569063 TCF12Q99081 682 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 ARHGAP9Q9BRR9 750 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 SYTL2Q9HCH5 934 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 KCND1Q9NSA2 647 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 SOHLH2Q9NX45 425 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 OR6C2Q9NZP2 312 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 GNPTGQ9UJJ9 305 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 PADI1Q9ULC6 663 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 KALRNO60229 2985 aa19.67■□□□□ 0.74
CLK3-225ENST00000569063 GOLGA6L10A0A0M3HER8 536 aa19.66■□□□□ 0.74
CLK3-225ENST00000569063 MAGEB16A2A368 324 aa19.66■□□□□ 0.74
CLK3-225ENST00000569063 TERTO14746 1132 aaKnown RBP19.66■□□□□ 0.74
CLK3-225ENST00000569063 ZNF185O15231 689 aa19.66■□□□□ 0.74
CLK3-225ENST00000569063 NKX2-8O15522 239 aa19.66■□□□□ 0.74
CLK3-225ENST00000569063 KDM1AO60341 852 aa19.66■□□□□ 0.74
CLK3-225ENST00000569063 DLSTP36957 453 aa19.66■□□□□ 0.74
CLK3-225ENST00000569063 CSE1LP55060 971 aaKnown RBP19.66■□□□□ 0.74
CLK3-225ENST00000569063 MC1RQ01726 317 aa19.66■□□□□ 0.74
CLK3-225ENST00000569063 TYSND1Q2T9J0 566 aa19.66■□□□□ 0.74
CLK3-225ENST00000569063 KIAA0930Q6ICG6 404 aaPredicted RBP19.66■□□□□ 0.74
CLK3-225ENST00000569063 SDCCAG8Q86SQ7 713 aaPredicted RBP19.66■□□□□ 0.74
CLK3-225ENST00000569063 KRT222Q8N1A0 295 aa19.66■□□□□ 0.74
CLK3-225ENST00000569063 RNF31Q96EP0 1072 aa19.66■□□□□ 0.74
CLK3-225ENST00000569063 CATSPER2Q96P56 530 aa19.66■□□□□ 0.74
CLK3-225ENST00000569063 TRAPPC9Q96Q05 1148 aa19.66■□□□□ 0.74
CLK3-225ENST00000569063 PANX3Q96QZ0 392 aa19.66■□□□□ 0.74
CLK3-225ENST00000569063 XAB2Q9HCS7 855 aaKnown RBP19.66■□□□□ 0.74
CLK3-225ENST00000569063 LHX9Q9NQ69 397 aa19.66■□□□□ 0.74
CLK3-225ENST00000569063 LATS2Q9NRM7 1088 aa19.66■□□□□ 0.74
CLK3-225ENST00000569063 CROTQ9UKG9 612 aa19.66■□□□□ 0.74
CLK3-225ENST00000569063 PIPSLA2A3N6 862 aa19.65■□□□□ 0.74
CLK3-225ENST00000569063 SDR42E2A6NKP2 422 aa19.65■□□□□ 0.74
CLK3-225ENST00000569063 KPNA5O15131 536 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms