RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 CRADDP78560 199 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 SEMA3AQ14563 771 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 ITIH4Q14624 930 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 IGFBP7Q16270 282 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 DEFB110Q30KQ9 67 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 PTCHD3Q3KNS1 767 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 SYTL3Q4VX76 610 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 TSTD2Q5T7W7 516 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 ZNF534Q76KX8 674 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 FAM20CQ8IXL6 584 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 ADGRF3Q8IZF5 1079 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 C2orf73Q8N5S3 287 aaPredicted RBP11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 CCDC89Q8N998 374 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 CFAP61Q8NHU2 1237 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 LKAAEAR1Q8TD35 194 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 CLIP3Q96DZ5 547 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 FCRL4Q96PJ5 515 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 TRAPPC9Q96Q05 1148 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 TRIM55Q9BYV6 548 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 TFB2MQ9H5Q4 396 aaKnown RBP11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 MVB12BQ9H7P6 319 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 C1GALT1Q9NS00 363 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 SPHK1Q9NYA1 384 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 ACTR10Q9NZ32 417 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 TUBD1Q9UJT1 453 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 TLK1Q9UKI8 766 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 ICKQ9UPZ9 632 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 BTRCQ9Y297 605 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 MAN2B2Q9Y2E5 1009 aa11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 RP1L1Q8IWN7 2480 aaPredicted RBP11.85□□□□□ -0.51
GTF3C1-208ENST00000567843 ARGFXA6NJG6 315 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 BHMG1C9JSJ3 638 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 LIN7AO14910 233 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 HCRTR1O43613 425 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 SUN1O94901 812 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 FTH1P02794 183 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 CTSBP07858 339 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 OR56A5P0C7T3 313 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 TPBGLP0DKB5 382 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 ADRA1DP25100 572 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 PTPN4P29074 926 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 KCNJ1P48048 391 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 CSRP3P50461 194 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 RPS15P62841 145 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 RPA4Q13156 261 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 SEMA5AQ13591 1074 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 IL10RAQ13651 578 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 SIX1Q15475 284 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 LACTB2Q53H82 288 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 PLEKHS1Q5SXH7 462 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 MEI1Q5TIA1 1274 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 CPZQ66K79 652 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 UNC5AQ6ZN44 842 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 CDHR3Q6ZTQ4 885 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 HOOK3Q86VS8 718 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 BPHLQ86WA6 291 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 VRK3Q8IV63 474 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 KRT222Q8N1A0 295 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 OR4L1Q8NH43 312 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 C19orf43Q9BQ61 176 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 TSGA10Q9BZW7 698 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 SLC7A5P2Q9GIP4 190 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 FANCEQ9HB96 536 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 FAM60AQ9NP50 221 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 CASS4Q9NQ75 786 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 CHRAC1Q9NRG0 131 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 MARCH4Q9P2E8 410 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 FARSAQ9Y285 508 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 KLHL20Q9Y2M5 609 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 TCAF1Q9Y4C2 921 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 PCDHGA6Q9Y5G7 932 aa11.84□□□□□ -0.51
GTF3C1-208ENST00000567843 PIKFYVEQ9Y2I7 2098 aa11.83□□□□□ -0.51
GTF3C1-208ENST00000567843 SLC5A10A0PJK1 596 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 ERI2A8K979 691 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 C2orf74A8MZ97 194 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 C21orf140B9A014 251 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 MKRN2OSH3BPM6 223 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 MEN1O00255 615 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 PDGFAP04085 211 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 KLK3P07288 261 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 UGT2B7P16662 529 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 CYP2A7P20853 494 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 PSMA3P25788 255 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 ACADLP28330 430 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 CCR7P32248 378 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 CXCR5P32302 372 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 PRAMEP78395 509 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 BASP1P80723 227 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 HSPA14Q0VDF9 509 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 TRIP13Q15645 432 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 ZIC1Q15915 447 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 CRTC2Q53ET0 693 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 FASTKD1Q53R41 847 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 ZNF789Q5FWF6 425 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 AFTPHQ6ULP2 937 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 SPESP1Q6UW49 350 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 CES3Q6UWW8 571 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 TAX1BP1Q86VP1 789 aa11.83□□□□□ -0.52
GTF3C1-208ENST00000567843 ENDOVQ8N8Q3 282 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms