RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 PADI2Q9Y2J8 665 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 ZNF451Q9Y4E5 1061 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 PCDHGB7Q9Y5F8 929 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 AP1M2Q9Y6Q5 423 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 NBASA2RRP1 2371 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 MROH6A6NGR9 719 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 ARGFXA6NJG6 315 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 K7EM74 188 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 BTN3A3O00478 584 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 DNAJB5O75953 348 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 METTL18O95568 372 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 AP2A1O95782 977 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 OR56A5P0C7T3 313 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 ST6GAL1P15907 406 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 NR1D1P20393 614 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 MSNP26038 577 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 PDHA2P29803 388 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 CD97P48960 835 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 LMAN1P49257 510 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 CDKN1CP49918 316 aaPredicted RBP13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 ITIH4Q14624 930 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 SYTL3Q4VX76 610 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 AADACL2Q6P093 401 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 MED25Q71SY5 747 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 SYTL1Q8IYJ3 562 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 TBC1D21Q8IYX1 336 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 FAM26EQ8N5C1 309 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 ENDOVQ8N8Q3 282 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 TMEM102Q8N9M5 508 aaPredicted RBP13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 OR1L3Q8NH93 324 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 ELMO1Q92556 727 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 MIB2Q96AX9 1013 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 PPM1MQ96MI6 270 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 IP6K3Q96PC2 410 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 TRAPPC9Q96Q05 1148 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 RUFY1Q96T51 708 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 TMEM121Q9BTD3 319 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 HGH1Q9BTY7 390 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 TSSK1BQ9BXA7 367 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 ACTR10Q9NZ32 417 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 OR6C2Q9NZP2 312 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 ANKMY1Q9P2S6 941 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 ASF1AQ9Y294 204 aa13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 REXO2Q9Y3B8 237 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-204ENST00000558020 CCDC78A2IDD5 438 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 E7EVH7 732 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 KLHL41O60662 606 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 TMEM63AO94886 807 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 IGHEP01854 428 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 VARSP26640 1264 aaKnown RBP13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 RORAP35398 523 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 MLLT10P55197 1068 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 CDH17Q12864 832 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 IL10RAQ13651 578 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 DBN1Q16643 649 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 SPESP1Q6UW49 350 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 PACS1Q6VY07 963 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 RAD9BQ6WBX8 426 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 NLRP9Q7RTR0 991 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 RAB43Q86YS6 212 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 PIANPQ8IYJ0 282 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 ADGRF3Q8IZF5 1079 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 SLC35B2Q8TB61 432 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 DHRS4Q9BTZ2 278 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 TRIM55Q9BYV6 548 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 FRMD8P1Q9BZ68 369 aaPredicted RBP13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 CHRNA10Q9GZZ6 450 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 MLXIPLQ9NP71 852 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 PCMTD2Q9NV79 361 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 GPN3Q9UHW5 284 aaPredicted RBP13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 PTPN13Q12923 2485 aa13.18□□□□□ -0.3
SNRPA1-204ENST00000558020 NAV2Q8IVL1 2488 aa13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 HEATR9A2RTY3 570 aa13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 DDX3YO15523 660 aaKnown RBP13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 ZNF749O43361 778 aa13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 DPM1O60762 260 aa13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 OR2B3O76000 313 aa13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 RPN2P04844 631 aa13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 PSMA3P25788 255 aa13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 PTGIRP43119 386 aa13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 SRSF1Q07955 248 aaKnown RBP eCLIP13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 ABRQ12979 859 aa13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 KLF1Q13351 362 aaPredicted RBP13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 NCF4Q15080 339 aa13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 ZNF658BQ4V348 819 aaPredicted RBP13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 PRAMEF17Q5VTA0 474 aa13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 PAPD7Q5XG87 772 aaKnown RBP13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 PPP1R21Q6ZMI0 780 aa13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 UNC5AQ6ZN44 842 aa13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 RNF10Q8N5U6 811 aaKnown RBP13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 ACRBPQ8NEB7 543 aa13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 XKR8Q9H6D3 395 aa13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 TDRKHQ9Y2W6 561 aaKnown RBP13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 LRRK2Q5S007 2527 aa13.17□□□□□ -0.3
SNRPA1-204ENST00000558020 PRRC2CQ9Y520 2896 aaKnown RBP13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 CCDC162PA2VCL2 907 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 CLEC18AA5D8T8 446 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 PEX12O00623 359 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 FTCDO95954 541 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 GP1BBP13224 206 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms