RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 CLEC6AQ6EIG7 209 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 Q6ZS46 218 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 ZNF765Q7L2R6 523 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.23□□□□□ -1.25
SPG11-204ENST00000557866 DSG4Q86SJ6 1040 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 ADAMTSL2Q86TH1 951 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 SYVN1Q86TM6 617 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 TRIM74Q86UV6 250 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 RASGRP3Q8IV61 690 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 SUGP1Q8IWZ8 645 aaKnown RBP7.23□□□□□ -1.25
SPG11-204ENST00000557866 RAVER1Q8IY67 606 aaKnown RBP7.23□□□□□ -1.25
SPG11-204ENST00000557866 CHPFQ8IZ52 775 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 ZNF513Q8N8E2 541 aaPredicted RBP7.23□□□□□ -1.25
SPG11-204ENST00000557866 CSGALNACT1Q8TDX6 532 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 TRPC4APQ8TEL6 797 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 AGAP11Q8TF27 550 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 UTP4Q969X6 686 aaKnown RBP7.23□□□□□ -1.25
SPG11-204ENST00000557866 ESAMQ96AP7 390 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 DCUN1D1Q96GG9 259 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 PPP1R16AQ96I34 528 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 NSL1Q96IY1 281 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 MAELQ96JY0 434 aaKnown RBP7.23□□□□□ -1.25
SPG11-204ENST00000557866 FAR2Q96K12 515 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 PPP1R36Q96LQ0 422 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 PANX3Q96QZ0 392 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 MIPEPQ99797 713 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 CCDC28BQ9BUN5 200 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 LRMDAQ9H2I8 198 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 ZNF385DQ9H6B1 395 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 EML4Q9HC35 981 aaKnown RBP7.23□□□□□ -1.25
SPG11-204ENST00000557866 ZBTB26Q9HCK0 441 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 CD248Q9HCU0 757 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 ARHGEF3Q9NR81 526 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 TXLNGQ9NUQ3 528 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 NUDT4Q9NZJ9 180 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 CD274Q9NZQ7 290 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 EIF2B4Q9UI10 523 aaKnown RBP7.23□□□□□ -1.25
SPG11-204ENST00000557866 LNPEPQ9UIQ6 1025 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 PTBP2Q9UKA9 531 aaKnown RBP7.23□□□□□ -1.25
SPG11-204ENST00000557866 PCTPQ9UKL6 214 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 CDYLQ9Y232 598 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 APOBEC2Q9Y235 224 aaKnown RBP7.23□□□□□ -1.25
SPG11-204ENST00000557866 TRAF6Q9Y4K3 522 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 OARD1Q9Y530 152 aa7.23□□□□□ -1.25
SPG11-204ENST00000557866 MYO9BQ13459 2157 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 TNRC18O15417 2968 aaPredicted RBP7.22□□□□□ -1.25
SPG11-204ENST00000557866 TMEM265A0A087WTH1 108 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 A0A1W2PQF6 199 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 CFAP73A6NFT4 308 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 IGLON5A6NGN9 336 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 SOX1O00570 391 aaPredicted RBP7.22□□□□□ -1.25
SPG11-204ENST00000557866 E2F3O00716 465 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 INPP4BO15327 924 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 MBTPS2O43462 519 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 TSPAN6O43657 245 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 NUAK1O60285 661 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 MAGEC1O60732 1142 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 GPC4O75487 556 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 ENO1P06733 434 aaKnown RBP7.22□□□□□ -1.25
SPG11-204ENST00000557866 FGF4P08620 206 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 KRT16P08779 473 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 CBSLP0DN79 551 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 AOC1P19801 751 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 MSH3P20585 1137 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 AKT1P31749 480 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 CBSP35520 551 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 MAGEA9P43362 315 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 RGS4P49798 205 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 DPTQ07507 201 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 TMEM115Q12893 351 aaPredicted RBP7.22□□□□□ -1.25
SPG11-204ENST00000557866 LCP2Q13094 533 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 KLF10Q13118 480 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 FGL2Q14314 439 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 NAA25Q14CX7 972 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 PON2Q15165 354 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 PCBP2Q15366 365 aaKnown RBP eCLIP7.22□□□□□ -1.25
SPG11-204ENST00000557866 CST6Q15828 149 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 CRY1Q16526 586 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 TTLL9Q3SXZ7 439 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 LDLRAP1Q5SW96 308 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 FAM46CQ5VWP2 391 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 METTL21CQ5VZV1 264 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 TMEM198Q66K66 360 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 MBOAT1Q6ZNC8 495 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 RINLQ6ZS11 566 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 ADGRG6Q86SQ4 1221 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 CACUL1Q86Y37 369 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 KRTAP1-3Q8IUG1 177 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 CLYBLQ8N0X4 340 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 MYO1HQ8N1T3 1032 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 SLC44A3Q8N4M1 653 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 HDDC3Q8N4P3 179 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 CPSF7Q8N684 471 aaKnown RBP7.22□□□□□ -1.25
SPG11-204ENST00000557866 LILRA3Q8N6C8 439 aaPredicted RBP7.22□□□□□ -1.25
SPG11-204ENST00000557866 IL17RCQ8NAC3 791 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 PLA2G15Q8NCC3 412 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 PDPRQ8NCN5 879 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 FBXO27Q8NI29 283 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 ACTRT2Q8TDY3 377 aa7.22□□□□□ -1.25
SPG11-204ENST00000557866 CXorf40AQ8TE69 158 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms