RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 TSEN34Q9BSV6 310 aaKnown RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 REPIN1Q9BWE0 567 aaKnown RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 RBM4Q9BWF3 364 aaKnown RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 CD244Q9BZW8 370 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 HMX1Q9NP08 348 aaPredicted RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 RHBDL2Q9NX52 303 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 SMPD4Q9NXE4 827 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 IL17CQ9P0M4 197 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 LHX3Q9UBR4 397 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 LIMD1Q9UGP4 676 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 ADGRE2Q9UHX3 823 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 THSD7BQ9C0I4 1608 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 C1orf232A0A0U1RR37 186 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.86□□□□□ -1.31
TDP1-213ENST00000555880 ELOVL7A1L3X0 281 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 PABPN1LA6NDY0 278 aaKnown RBP6.86□□□□□ -1.31
TDP1-213ENST00000555880 CXCR6O00574 342 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 FFAR3O14843 346 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 ANKRD28O15084 1053 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 GPR42O15529 346 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 DFNA5O60443 496 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 TBL1XO60907 577 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 SEC22BO75396 215 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 E2F6O75461 281 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 TRIM16O95361 564 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 CPNE6O95741 557 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 CST1P01037 141 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 KRT6AP02538 564 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 KLKB1P03952 638 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 KRT6BP04259 564 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 MBL2P11226 248 aaPredicted RBP6.86□□□□□ -1.31
TDP1-213ENST00000555880 SELPP16109 830 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 EPB42P16452 691 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 CTPS1P17812 591 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 ITGB6P18564 788 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 CCNA2P20248 432 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 MAPK8P45983 427 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 GNPDA1P46926 289 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 STT3AP46977 705 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 KRT6CP48668 564 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 ENTPD1P49961 510 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 SGSHP51688 502 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 RAB15P59190 212 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 PLIN5Q00G26 463 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 CDH18Q13634 790 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 SELPLGQ14242 412 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 MYBPC3Q14896 1274 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 PTGR1Q14914 329 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 C18orf21Q32NC0 220 aaPredicted RBP6.86□□□□□ -1.31
TDP1-213ENST00000555880 RFTN2Q52LD8 501 aaPredicted RBP6.86□□□□□ -1.31
TDP1-213ENST00000555880 PYCR3Q53H96 274 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 CXorf57Q6NSI4 855 aaKnown RBP6.86□□□□□ -1.31
TDP1-213ENST00000555880 KIAA1841Q6NSI8 718 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 TBPL2Q6SJ96 375 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 RNF165Q6ZSG1 346 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 TMEM26Q6ZUK4 368 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 SNX20Q7Z614 316 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 ADHFE1Q8IWW8 467 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 EID3Q8N140 333 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 LIX1Q8N485 282 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 RNF217Q8TC41 542 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 RAB2BQ8WUD1 216 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 HDAC2Q92769 488 aaKnown RBP6.86□□□□□ -1.31
TDP1-213ENST00000555880 ZNF583Q96ND8 569 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 CFHR5Q9BXR6 569 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 SLC29A3Q9BZD2 475 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 ACTL8Q9H568 366 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 SOX17Q9H6I2 414 aaPredicted RBP6.86□□□□□ -1.31
TDP1-213ENST00000555880 ASB8Q9H765 288 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 ACTR8Q9H981 624 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 NTN4Q9HB63 628 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 FANCEQ9HB96 536 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 ZFYVE1Q9HBF4 777 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 LRTM1Q9HBL6 345 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 LATS2Q9NRM7 1088 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 GKN1Q9NS71 199 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 TBCCD1Q9NVR7 557 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 TOR4AQ9NXH8 423 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 KLQ9UEF7 1012 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 TRPS1Q9UHF7 1281 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 CRLS1Q9UJA2 301 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 ZNF490Q9ULM2 529 aaPredicted RBP6.86□□□□□ -1.31
TDP1-213ENST00000555880 INVSQ9Y283 1065 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 ST14Q9Y5Y6 855 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 PIKFYVEQ9Y2I7 2098 aa6.86□□□□□ -1.31
TDP1-213ENST00000555880 A0A1W2PPW3 197 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 NT5C1B-RDH14C9J2C7 533 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 K7EPI3 171 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 GPR39O43194 453 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 FKTNO75072 461 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 SLC25A14O95258 325 aaPredicted RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 ATE1O95260 518 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 PGLSO95336 258 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 LATS1O95835 1130 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 PGRP06401 933 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 RETP07949 1114 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 EBLN1P0CF75 366 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 PCSK2P16519 638 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 JUNBP17275 347 aaPredicted RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 ELK4P28324 431 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms