RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 SGSM3Q96HU1 749 aa11.15□□□□□ -0.62
TMEM116-218ENST00000552839 PANX3Q96QZ0 392 aa11.15□□□□□ -0.62
TMEM116-218ENST00000552839 WDR83Q9BRX9 315 aaKnown RBP11.15□□□□□ -0.62
TMEM116-218ENST00000552839 GSDMCQ9BYG8 508 aa11.15□□□□□ -0.62
TMEM116-218ENST00000552839 B3GNT4Q9C0J1 378 aa11.15□□□□□ -0.62
TMEM116-218ENST00000552839 LRRC4CQ9HCJ2 640 aa11.15□□□□□ -0.62
TMEM116-218ENST00000552839 SARS2Q9NP81 518 aaKnown RBP11.15□□□□□ -0.62
TMEM116-218ENST00000552839 MRPL40Q9NQ50 206 aaKnown RBP11.15□□□□□ -0.62
TMEM116-218ENST00000552839 LRIT1Q9P2V4 623 aa11.15□□□□□ -0.62
TMEM116-218ENST00000552839 SLC17A4Q9Y2C5 497 aa11.15□□□□□ -0.62
TMEM116-218ENST00000552839 MAN2B2Q9Y2E5 1009 aa11.15□□□□□ -0.62
TMEM116-218ENST00000552839 DNAJC16Q9Y2G8 782 aa11.15□□□□□ -0.62
TMEM116-218ENST00000552839 OAS3Q9Y6K5 1087 aaKnown RBP11.15□□□□□ -0.62
TMEM116-218ENST00000552839 PDZK1P1A8MUH7 402 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 POC1B-GALNT4F8VUJ3 575 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 NUAK1O60285 661 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 DNAJC6O75061 913 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 CEACAM5P06731 702 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 CHRM3P20309 590 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 SAT1P21673 171 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 PSMA3P25788 255 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 ARNTP27540 789 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 CASRP41180 1078 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 ACTR1BP42025 376 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 MSH2P43246 934 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 PPM1FP49593 454 aaPredicted RBP11.14□□□□□ -0.63
TMEM116-218ENST00000552839 ACTR1AP61163 376 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 KCNAB2Q13303 367 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 LRP8Q14114 963 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 BOP1Q14137 746 aaKnown RBP11.14□□□□□ -0.63
TMEM116-218ENST00000552839 SEMA3AQ14563 771 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 NAA30Q147X3 362 aaPredicted RBP11.14□□□□□ -0.63
TMEM116-218ENST00000552839 BRD3Q15059 726 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 TYSND1Q2T9J0 566 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 TTLL9Q3SXZ7 439 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 KBTBD12Q3ZCT8 623 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 TMEM164Q5U3C3 297 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 TAF8Q7Z7C8 310 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 RELL1Q8IUW5 271 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 SKA2Q8WVK7 121 aaPredicted RBP11.14□□□□□ -0.63
TMEM116-218ENST00000552839 ELMO1Q92556 727 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 NKD1Q969G9 470 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 ELMO2Q96JJ3 720 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 PSMG3-AS1Q96PY0 264 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 RUFY1Q96T51 708 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 CPNE1Q99829 537 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 RDH14Q9HBH5 336 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 CNOT6Q9ULM6 557 aaKnown RBP11.14□□□□□ -0.63
TMEM116-218ENST00000552839 CRYL1Q9Y2S2 319 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 PRKAB1Q9Y478 270 aa11.14□□□□□ -0.63
TMEM116-218ENST00000552839 PABPN1LA6NDY0 278 aaKnown RBP11.13□□□□□ -0.63
TMEM116-218ENST00000552839 STMND1H3BQB6 276 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 RIPK2O43353 540 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 B4GAT1O43505 415 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 OR1I1O60431 355 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 SNX2O60749 519 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 VPS26AO75436 327 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 ESR1P03372 595 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 ABHD2P08910 425 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 SLC2A4P14672 509 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 SPRP35270 261 aaPredicted RBP11.13□□□□□ -0.63
TMEM116-218ENST00000552839 GP5P40197 560 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 PRLHRP49683 370 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 GPX6P59796 221 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 B4GALNT1Q00973 533 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 PDAP1Q13442 181 aaKnown RBP11.13□□□□□ -0.63
TMEM116-218ENST00000552839 C14orf28Q4W4Y0 310 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 TEDDM1Q5T9Z0 273 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 UGT3A1Q6NUS8 523 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 SLC30A9Q6PML9 568 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 MICALCLQ6ZW33 695 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 OTOAQ7RTW8 1153 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 PIM3Q86V86 326 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 AMZ2Q86W34 360 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 CLDN19Q8N6F1 224 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 RASGEF1AQ8N9B8 481 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 C2CD4AQ8NCU7 369 aaPredicted RBP11.13□□□□□ -0.63
TMEM116-218ENST00000552839 RCBTB1Q8NDN9 531 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 FAM46DQ8NEK8 389 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 CCL4L1Q8NHW4 92 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 HM13Q8TCT9 377 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 AENQ8WTP8 325 aaKnown RBP11.13□□□□□ -0.63
TMEM116-218ENST00000552839 LPGAT1Q92604 370 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 PMEPA1Q969W9 287 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 VPS39Q96JC1 886 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 TIMM29Q9BSF4 260 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 ZMYND15Q9H091 742 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 STN1Q9H668 368 aaKnown RBP11.13□□□□□ -0.63
TMEM116-218ENST00000552839 ACSS3Q9H6R3 686 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 KLC4Q9NSK0 619 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 SLC17A6Q9P2U8 582 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 TRMT6Q9UJA5 497 aaKnown RBP11.13□□□□□ -0.63
TMEM116-218ENST00000552839 TUBD1Q9UJT1 453 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 ANAPC2Q9UJX6 822 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 RAB21Q9UL25 225 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 CORO1CQ9ULV4 474 aaPredicted RBP11.13□□□□□ -0.63
TMEM116-218ENST00000552839 KCNK6Q9Y257 313 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 COMMD10Q9Y6G5 202 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 DGKBQ9Y6T7 804 aa11.13□□□□□ -0.63
TMEM116-218ENST00000552839 NBASA2RRP1 2371 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms