RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 FDXRP22570 491 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 CNTFP26441 200 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 TYK2P29597 1187 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 ATP5DP30049 168 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 CCNFP41002 786 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 BDKRB1P46663 353 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 LIMK2P53671 638 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 EPHA4P54764 986 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 TAS2R39P59534 338 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 RAB10P61026 200 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 GPLD1P80108 840 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 TSTA3Q13630 321 aaPredicted RBP6.15□□□□□ -1.42
LTBR-212ENST00000543542 ZNF460Q14592 562 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 NAA30Q147X3 362 aaPredicted RBP6.15□□□□□ -1.42
LTBR-212ENST00000543542 TAF1BQ53T94 588 aaPredicted RBP6.15□□□□□ -1.42
LTBR-212ENST00000543542 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.15□□□□□ -1.42
LTBR-212ENST00000543542 UBAP2Q5T6F2 1119 aaKnown RBP6.15□□□□□ -1.42
LTBR-212ENST00000543542 PHF19Q5T6S3 580 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 N4BP2L1Q5TBK1 243 aaPredicted RBP6.15□□□□□ -1.42
LTBR-212ENST00000543542 HES3Q5TGS1 186 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 IRGCQ6NXR0 463 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 FOXR1Q6PIV2 292 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 RBM44Q6ZP01 1051 aaKnown RBP6.15□□□□□ -1.42
LTBR-212ENST00000543542 NEK10Q6ZWH5 1172 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 USP53Q70EK8 1073 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 FRA10AC1Q70Z53 315 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 UBE2R2Q712K3 238 aaPredicted RBP6.15□□□□□ -1.42
LTBR-212ENST00000543542 PIWIL4Q7Z3Z4 852 aaKnown RBP6.15□□□□□ -1.42
LTBR-212ENST00000543542 TBC1D1Q86TI0 1168 aaPredicted RBP6.15□□□□□ -1.42
LTBR-212ENST00000543542 C17orf82Q86X59 251 aaPredicted RBP6.15□□□□□ -1.42
LTBR-212ENST00000543542 DCUN1D3Q8IWE4 304 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 GALNT15Q8N3T1 639 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 OR4E2Q8NGC2 313 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 OR52E1Q8NGJ3 308 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 OR5K2Q8NHB8 316 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 EEF1AKMT1Q8WVE0 214 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 ZFPM2Q8WW38 1151 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 RAD51AP1Q96B01 352 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 HIST1H2AHQ96KK5 128 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 TSNARE1Q96NA8 513 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 TGM7Q96PF1 710 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 DEPDC7Q96QD5 511 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 SLC30A3Q99726 388 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 OLFM1Q99784 485 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 HIST1H2AJQ99878 128 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 H2AFJQ9BTM1 129 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 TRIM54Q9BYV2 358 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 VPS11Q9H270 941 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 EPB41L1Q9H4G0 881 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 XKR8Q9H6D3 395 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 KIR3DX1Q9H7L2 352 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 RDH14Q9HBH5 336 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 POPDC3Q9HBV1 291 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 ABCF3Q9NUQ8 709 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 HRASLS2Q9NWW9 162 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 AKAP7Q9P0M2 348 aaPredicted RBP6.15□□□□□ -1.42
LTBR-212ENST00000543542 KLHL42Q9P2K6 505 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 TBK1Q9UHD2 729 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 CIDEBQ9UHD4 219 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 SLC24A2Q9UI40 661 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 LNPEPQ9UIQ6 1025 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 TLK1Q9UKI8 766 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 PLAGL1Q9UM63 463 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 RUVBL2Q9Y230 463 aaKnown RBP6.15□□□□□ -1.42
LTBR-212ENST00000543542 CDYLQ9Y232 598 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 NFS1Q9Y697 457 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 U3KQA8 63 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 DNAH14Q0VDD8 3507 aa6.15□□□□□ -1.43
LTBR-212ENST00000543542 GPR179Q6PRD1 2367 aa6.15□□□□□ -1.43
LTBR-212ENST00000543542 CFAP54Q96N23 3096 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 IQANK1A0A1B0GTG1 560 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 LILRA5A6NI73 299 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 ZNF839A8K0R7 811 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 A8MU76 341 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 ISM1B1AKI9 464 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 EIF3FO00303 357 aaPredicted RBP6.14□□□□□ -1.43
LTBR-212ENST00000543542 BTN3A1O00481 513 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 PHGDHO43175 533 aaKnown RBP6.14□□□□□ -1.43
LTBR-212ENST00000543542 MAP3K7O43318 606 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 B4GAT1O43505 415 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 TCEA3O75764 348 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 C1orf105O95561 183 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 CPNE6O95741 557 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 MT-CO3P00414 261 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 S100BP04271 92 aaPredicted RBP6.14□□□□□ -1.43
LTBR-212ENST00000543542 C8GP07360 202 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 SNRPAP09012 282 aaKnown RBP6.14□□□□□ -1.43
LTBR-212ENST00000543542 CCDC166P0CW27 439 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 KRT15P19012 456 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 POLR2CP19387 275 aaPredicted RBP6.14□□□□□ -1.43
LTBR-212ENST00000543542 CD9P21926 228 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 MPSTP25325 297 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 ACADLP28330 430 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 CD1CP29017 333 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 CRABP2P29373 138 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 SHMT2P34897 504 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 HSD17B3P37058 310 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 ARL4DP49703 201 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 SERPINB8P50452 374 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 PGGT1BP53609 377 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms