RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 PEX13Q92968 403 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 FATE1Q969F0 183 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 SDCCAG3Q96C92 435 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 CLSTN3Q9BQT9 956 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 NUSAP1Q9BXS6 441 aaKnown RBP13.39□□□□□ -0.27
BNIP3-202ENST00000540159 ARL15Q9NXU5 204 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 PCDHGA8Q9Y5G5 932 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 CPQQ9Y646 472 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.38□□□□□ -0.27
BNIP3-202ENST00000540159 G3V2T6 193 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 H0YJX3 145 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 AXIN1O15169 862 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 OTCP00480 354 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 PGRP06401 933 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 HNRNPCP07910 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
BNIP3-202ENST00000540159 ZNF7P17097 686 aaPredicted RBP13.38□□□□□ -0.27
BNIP3-202ENST00000540159 BPIP17213 487 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 CDKN2CP42773 168 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 NFATC2Q13469 925 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 SIM2Q14190 667 aaPredicted RBP13.38□□□□□ -0.27
BNIP3-202ENST00000540159 FAM98BQ52LJ0 330 aaKnown RBP13.38□□□□□ -0.27
BNIP3-202ENST00000540159 ALG1LQ6GMV1 187 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 ADAMTSL2Q86TH1 951 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 TNIP2Q8NFZ5 429 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 ASIC4Q96FT7 647 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 SPATA17Q96L03 361 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 BARD1Q99728 777 aaKnown RBP13.38□□□□□ -0.27
BNIP3-202ENST00000540159 ZIM2Q9NZV7 527 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 PADI4Q9UM07 663 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 SPEGQ15772 3267 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 UPK1AO00322 258 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 GAPDHSO14556 408 aaPredicted RBP13.38□□□□□ -0.27
BNIP3-202ENST00000540159 BMP10O95393 424 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 KPNA1P52294 538 aaPredicted RBP13.38□□□□□ -0.27
BNIP3-202ENST00000540159 EEFSECP57772 596 aaKnown RBP13.38□□□□□ -0.27
BNIP3-202ENST00000540159 CYP4F3Q08477 520 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 SLC14A1Q13336 389 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 MYBPC3Q14896 1274 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 SULT1C3Q6IMI6 304 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 CNIH3Q8TBE1 160 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 OSCP1Q8WVF1 389 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 SLC47A1Q96FL8 570 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 RHNO1Q9BSD3 238 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 FAM126AQ9BYI3 521 aaPredicted RBP13.38□□□□□ -0.27
BNIP3-202ENST00000540159 P2RY12Q9H244 342 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 TMCO1Q9UM00 188 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 NPIPB15A6NHN6 443 aaPredicted RBP13.38□□□□□ -0.27
BNIP3-202ENST00000540159 NRG2O14511 850 aaPredicted RBP13.38□□□□□ -0.27
BNIP3-202ENST00000540159 KLK8O60259 260 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 DEAF1O75398 565 aaPredicted RBP13.38□□□□□ -0.27
BNIP3-202ENST00000540159 SERPINA1P01009 418 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 THRBP10828 461 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 FCGR1AP12314 374 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 SELPP16109 830 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 HMGCLP35914 325 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 PHC1P78364 1004 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 BCL2L1Q07817 233 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 SREBF2Q12772 1141 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 CRY1Q16526 586 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 TBC1D25Q3MII6 688 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 ELMSAN1Q6PJG2 1045 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 RBM23Q86U06 439 aaKnown RBP13.38□□□□□ -0.27
BNIP3-202ENST00000540159 PTRH1Q86Y79 214 aaKnown RBP13.38□□□□□ -0.27
BNIP3-202ENST00000540159 GPR26Q8NDV2 337 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 GTF2H4Q92759 462 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 ZBTB18Q99592 522 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 PARVBQ9HBI1 364 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 NUDT4Q9NZJ9 180 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 NEUROG3Q9Y4Z2 214 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 YIPF1Q9Y548 306 aa13.38□□□□□ -0.27
BNIP3-202ENST00000540159 PLXNA3P51805 1871 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 AREL1O15033 823 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 ANKRD28O15084 1053 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 PFKLP17858 780 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 HTR1EP28566 365 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 AQP1P29972 269 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 BORAQ6PGQ7 559 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 SERPINA13PQ6UXR4 307 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 PIWIL3Q7Z3Z3 882 aaKnown RBP13.37□□□□□ -0.27
BNIP3-202ENST00000540159 DNAJB7Q7Z6W7 309 aaPredicted RBP13.37□□□□□ -0.27
BNIP3-202ENST00000540159 MSRB3Q8IXL7 192 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 DRAXINQ8NBI3 349 aaPredicted RBP13.37□□□□□ -0.27
BNIP3-202ENST00000540159 NETO1Q8TDF5 533 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 PIH1D2Q8WWB5 315 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 DTNBP1Q96EV8 351 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 APOLD1Q96LR9 279 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 ARMC7Q9H6L4 198 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 LRTM1Q9HBL6 345 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 COMMD8Q9NX08 183 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 PCDHB14Q9Y5E9 798 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 GBF1Q92538 1859 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 GLYATL1P3A0A0U1RQE8 302 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 hCG_2039718K7EN88 272 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 CDH1P12830 882 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 WEE1P30291 646 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 AKT1P31749 480 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 CD70P32970 193 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 RGS4P49798 205 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 CCR3P51677 355 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 NAA20P61599 178 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms