RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 FGF21Q9NSA1 209 aa29.4■■■□□ 2.3
SSSCA1-207ENST00000533115 POLG2Q9UHN1 485 aa29.4■■■□□ 2.3
SSSCA1-207ENST00000533115 LNPEPQ9UIQ6 1025 aa29.4■■■□□ 2.3
SSSCA1-207ENST00000533115 BTRCQ9Y297 605 aa29.4■■■□□ 2.3
SSSCA1-207ENST00000533115 IQCF5A8MTL0 148 aa29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 PHF2O75151 1096 aa29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 VAPBO95292 243 aa29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 ARNTP27540 789 aa29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 PRDX3P30048 256 aaKnown RBP29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 CSE1LP55060 971 aaKnown RBP29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 LINC00303Q3SY05 128 aa29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 TMTC4Q5T4D3 741 aa29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 CAND1Q86VP6 1230 aaKnown RBP29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 ADGRF3Q8IZF5 1079 aa29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 OR5K2Q8NHB8 316 aa29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 ASZ1Q8WWH4 475 aa29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 EXTL1Q92935 676 aa29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 STAMBPL1Q96FJ0 436 aa29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 FCRL4Q96PJ5 515 aa29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 P2RY12Q9H244 342 aa29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 SOHLH2Q9NX45 425 aa29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 ICKQ9UPZ9 632 aa29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 RPS6KL1Q9Y6S9 549 aa29.39■■■□□ 2.3
SSSCA1-207ENST00000533115 GOLGA6L10A0A0M3HER8 536 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 SLC9B1P1A6NJY1 282 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 ZNF891A8MT65 544 aaPredicted RBP29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 ZNF185O15231 689 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 NDUFS3O75489 264 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 TMEM63AO94886 807 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 TIAF1O95411 115 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 FNTAP49354 379 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 TUBB4BP68371 445 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 HSPA14Q0VDF9 509 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 TUBB2AQ13885 445 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 COL9A2Q14055 689 aaPredicted RBP29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 PWWP2BQ6NUJ5 590 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 SLC22A15Q8IZD6 547 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 OTUD6BQ8N6M0 293 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 GRK7Q8WTQ7 553 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 PDLIM2Q96JY6 352 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 TUBB2BQ9BVA1 445 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 GNPTGQ9UJJ9 305 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 CDYLQ9Y232 598 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 PIEZO2Q9H5I5 2752 aa29.38■■■□□ 2.29
SSSCA1-207ENST00000533115 C2orf74A8MZ97 194 aa29.37■■■□□ 2.29
SSSCA1-207ENST00000533115 GPC4O75487 556 aa29.37■■■□□ 2.29
SSSCA1-207ENST00000533115 MLNP12872 115 aa29.37■■■□□ 2.29
SSSCA1-207ENST00000533115 SHMT2P34897 504 aa29.37■■■□□ 2.29
SSSCA1-207ENST00000533115 C19orf57Q0VDD7 668 aa29.37■■■□□ 2.29
SSSCA1-207ENST00000533115 TBR1Q16650 682 aa29.37■■■□□ 2.29
SSSCA1-207ENST00000533115 PTRHD1Q6GMV3 140 aaKnown RBP29.37■■■□□ 2.29
SSSCA1-207ENST00000533115 MRNIPQ6NTE8 343 aa29.37■■■□□ 2.29
SSSCA1-207ENST00000533115 LRRC6Q86X45 466 aa29.37■■■□□ 2.29
SSSCA1-207ENST00000533115 KRT222Q8N1A0 295 aa29.37■■■□□ 2.29
SSSCA1-207ENST00000533115 MCUQ8NE86 351 aa29.37■■■□□ 2.29
SSSCA1-207ENST00000533115 SEMA4CQ9C0C4 833 aa29.37■■■□□ 2.29
SSSCA1-207ENST00000533115 IL17BQ9UHF5 180 aa29.37■■■□□ 2.29
SSSCA1-207ENST00000533115 TDRKHQ9Y2W6 561 aaKnown RBP29.37■■■□□ 2.29
SSSCA1-207ENST00000533115 MT-ND3P03897 115 aa29.36■■■□□ 2.29
SSSCA1-207ENST00000533115 APOA4P06727 396 aa29.36■■■□□ 2.29
SSSCA1-207ENST00000533115 RPS3P23396 243 aaKnown RBP eCLIP29.36■■■□□ 2.29
SSSCA1-207ENST00000533115 AOAHP28039 575 aa29.36■■■□□ 2.29
SSSCA1-207ENST00000533115 GPR19Q15760 415 aa29.36■■■□□ 2.29
SSSCA1-207ENST00000533115 DNAJC21Q5F1R6 531 aaKnown RBP29.36■■■□□ 2.29
SSSCA1-207ENST00000533115 KIAA0930Q6ICG6 404 aaPredicted RBP29.36■■■□□ 2.29
SSSCA1-207ENST00000533115 CASC4Q6P4E1 433 aa29.36■■■□□ 2.29
SSSCA1-207ENST00000533115 SDCCAG8Q86SQ7 713 aaPredicted RBP29.36■■■□□ 2.29
SSSCA1-207ENST00000533115 VRK3Q8IV63 474 aa29.36■■■□□ 2.29
SSSCA1-207ENST00000533115 ZNF501Q96CX3 271 aaPredicted RBP29.36■■■□□ 2.29
SSSCA1-207ENST00000533115 ARHGAP9Q9BRR9 750 aa29.36■■■□□ 2.29
SSSCA1-207ENST00000533115 PITPNM3Q9BZ71 974 aa29.36■■■□□ 2.29
SSSCA1-207ENST00000533115 XAB2Q9HCS7 855 aaKnown RBP29.36■■■□□ 2.29
SSSCA1-207ENST00000533115 ACTR10Q9NZ32 417 aa29.36■■■□□ 2.29
SSSCA1-207ENST00000533115 USP27XA6NNY8 438 aa29.35■■■□□ 2.29
SSSCA1-207ENST00000533115 GOLGA8KD6RF30 607 aa29.35■■■□□ 2.29
SSSCA1-207ENST00000533115 GOLGA8TH3BQL2 631 aa29.35■■■□□ 2.29
SSSCA1-207ENST00000533115 CCNYL3P0C7X3 344 aa29.35■■■□□ 2.29
SSSCA1-207ENST00000533115 TPBGLP0DKB5 382 aa29.35■■■□□ 2.29
SSSCA1-207ENST00000533115 TMED2Q15363 201 aa29.35■■■□□ 2.29
SSSCA1-207ENST00000533115 UNC5AQ6ZN44 842 aa29.35■■■□□ 2.29
SSSCA1-207ENST00000533115 ZNF843Q8N446 348 aa29.35■■■□□ 2.29
SSSCA1-207ENST00000533115 OR8K5Q8NH50 307 aa29.35■■■□□ 2.29
SSSCA1-207ENST00000533115 MED8Q96G25 268 aa29.35■■■□□ 2.29
SSSCA1-207ENST00000533115 PANX3Q96QZ0 392 aa29.35■■■□□ 2.29
SSSCA1-207ENST00000533115 KCND1Q9NSA2 647 aa29.35■■■□□ 2.29
SSSCA1-207ENST00000533115 SAMD15Q9P1V8 674 aa29.35■■■□□ 2.29
SSSCA1-207ENST00000533115 CFAP46Q8IYW2 2715 aa29.35■■■□□ 2.29
SSSCA1-207ENST00000533115 MAGEB16A2A368 324 aa29.34■■■□□ 2.29
SSSCA1-207ENST00000533115 PIPSLA2A3N6 862 aa29.34■■■□□ 2.29
SSSCA1-207ENST00000533115 SDR42E2A6NKP2 422 aa29.34■■■□□ 2.29
SSSCA1-207ENST00000533115 GOLGA8MH3BSY2 632 aa29.34■■■□□ 2.29
SSSCA1-207ENST00000533115 KDM1AO60341 852 aa29.34■■■□□ 2.29
SSSCA1-207ENST00000533115 ST6GAL1P15907 406 aa29.34■■■□□ 2.29
SSSCA1-207ENST00000533115 PAMP19021 973 aa29.34■■■□□ 2.29
SSSCA1-207ENST00000533115 EXD3Q8N9H8 876 aa29.34■■■□□ 2.29
SSSCA1-207ENST00000533115 SERPINB12Q96P63 405 aa29.34■■■□□ 2.29
SSSCA1-207ENST00000533115 CROTQ9UKG9 612 aa29.34■■■□□ 2.29
SSSCA1-207ENST00000533115 PADI1Q9ULC6 663 aa29.34■■■□□ 2.29
SSSCA1-207ENST00000533115 PFDN6O15212 129 aa29.33■■■□□ 2.29
SSSCA1-207ENST00000533115 NKX2-8O15522 239 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 205 ms