RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 MTMR11A4FU01 709 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 LIN7AO14910 233 aaPredicted RBP14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 MYBPC3Q14896 1274 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 MED22Q15528 200 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 ADGRD1Q6QNK2 874 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 DCAKDQ8WVC6 231 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 CDK15Q96Q40 435 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 SMOQ99835 787 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 GTPBP2Q9BX10 602 aaKnown RBP14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 OSBPL2Q9H1P3 480 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 SCML2Q9UQR0 700 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 CCDC162PA2VCL2 907 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 SCELO95171 688 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 RB1P06400 928 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 TYRP14679 529 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 DCST1Q5T197 706 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 ZNF776Q68DI1 518 aaPredicted RBP14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 LIX1Q8N485 282 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 CNTD1Q8N815 330 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 PIGXQ8TBF5 258 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 LRRC15Q8TF66 581 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 ZSCAN5AQ9BUG6 496 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 EFCAB11Q9BUY7 163 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 C1orf109Q9NX04 203 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 GMEB2Q9UKD1 530 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 ADAMDEC1O15204 470 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 HOXD13P35453 343 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 FAUP35544 74 aaKnown RBP14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 NUP54Q7Z3B4 507 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 ANKRD46Q86W74 232 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 EFHD2Q96C19 240 aaPredicted RBP14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 DPYSL5Q9BPU6 564 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 BCO2Q9BYV7 579 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 KRT36O76013 467 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 FABP3P05413 133 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 PIM1P11309 404 aaPredicted RBP14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 ALDH4A1P30038 563 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 CASP9P55211 416 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 SNAPC1Q16533 368 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 COX18Q8N8Q8 333 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 PLEKHO2Q8TD55 490 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 BTBD1Q9H0C5 482 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 TDP1Q9NUW8 608 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 IFT80Q9P2H3 777 aaPredicted RBP14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 GNEQ9Y223 722 aaKnown RBP14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 TCHHQ07283 1943 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 PRORSD1PA6NEY8 169 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 DBTP11182 482 aaKnown RBP14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 SLC26A3P40879 764 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 HADHBP55084 474 aaKnown RBP14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 PDK3Q15120 406 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 PUS10Q3MIT2 529 aaKnown RBP14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 EIPR1Q53HC9 387 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 PIK3R6Q5UE93 754 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 TAS1R3Q7RTX0 852 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 FAM81AQ8TBF8 368 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 PAAF1Q9BRP4 392 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 PDCD10Q9BUL8 212 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 FANCFQ9NPI8 374 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 ARL8BQ9NVJ2 186 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 ALKBH4Q9NXW9 302 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 PCDHB11Q9Y5F2 797 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 NWD2Q9ULI1 1742 aa14.53□□□□□ -0.08
PCDHA9-202ENST00000532602 A8MU76 341 aa14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 LEFTY2O00292 366 aa14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 NRG3P56975 720 aa14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 ARL13AQ5H913 290 aaPredicted RBP14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 DCAF12L1Q5VU92 463 aa14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 FAM43BQ6ZT52 329 aaPredicted RBP14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 DNAJB8Q8NHS0 232 aa14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 NSMCE3Q96MG7 304 aa14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 CPED1A4D0V7 1026 aa14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 RYKP34925 604 aa14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 HKDC1Q2TB90 917 aa14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 LYSMD3Q7Z3D4 306 aa14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 SLC34A3Q8N130 599 aa14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 NATD1Q8N6N6 113 aa14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 COX4I2Q96KJ9 171 aa14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 TRNT1Q96Q11 434 aaKnown RBP14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 SSU72Q9NP77 194 aaKnown RBP14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 GPC6Q9Y625 555 aaPredicted RBP14.52□□□□□ -0.08
PCDHA9-202ENST00000532602 PDPK1O15530 556 aa14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 HCN1O60741 890 aa14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 MMP20O60882 483 aa14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 GPR32O75388 356 aa14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 KCNE1P15382 129 aa14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 CBX5P45973 191 aa14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 KHKP50053 298 aa14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 PGDP52209 483 aa14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 PLA2G16P53816 162 aa14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 DPYSQ14117 519 aa14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 AAK1Q2M2I8 961 aa14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 GSDMCQ9BYG8 508 aa14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 CNTN6Q9UQ52 1028 aa14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 DUXAA6NLW8 204 aa14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 KHDRBS3O75525 346 aaKnown RBP14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 TNFP01375 233 aa14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 GRK6P43250 576 aa14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 OR2AP1Q8NGE2 309 aa14.52□□□□□ -0.09
PCDHA9-202ENST00000532602 C8orf48Q96LL4 319 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms