RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 TSPAN12O95859 305 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 MT-ND3P03897 115 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 C2P06681 752 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 SLC35E2BP0CK96 405 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 GIMD1P0DJR0 217 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 ITGB6P18564 788 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 KRT15P19012 456 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 AK4P27144 223 aaPredicted RBP12.22□□□□□ -0.45
COPB1-208ENST00000532088 ACADLP28330 430 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 NDUFS1P28331 727 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 SLCO1A2P46721 670 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 ATP6V0D1P61421 351 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 BNIP3Q12983 259 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 SP140Q13342 867 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 ACSBG2Q5FVE4 666 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 TMEM214Q6NUQ4 689 aaKnown RBP12.22□□□□□ -0.45
COPB1-208ENST00000532088 IYDQ6PHW0 289 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 UNC5DQ6UXZ4 953 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 PRR23CQ6ZRP0 262 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 RAPH1Q70E73 1250 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 PIM3Q86V86 326 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 RASGRP3Q8IV61 690 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 RBM12BQ8IXT5 1001 aaKnown RBP12.22□□□□□ -0.45
COPB1-208ENST00000532088 CPNE9Q8IYJ1 553 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 ZNF295-AS1Q8N0V1 137 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 MYO1HQ8N1T3 1032 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 SLC25A45Q8N413 288 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 FAM181AQ8N9Y4 354 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 FBXO15Q8NCQ5 510 aaPredicted RBP12.22□□□□□ -0.45
COPB1-208ENST00000532088 OR4C6Q8NH72 309 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 FOPNLQ96NB1 174 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 SLC30A3Q99726 388 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 GTPBP2Q9BX10 602 aaKnown RBP12.22□□□□□ -0.45
COPB1-208ENST00000532088 ACBD3Q9H3P7 528 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 OSGEPL1Q9H4B0 414 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 SMOC1Q9H4F8 434 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 CAB39LQ9H9S4 337 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 SARS2Q9NP81 518 aaKnown RBP12.22□□□□□ -0.45
COPB1-208ENST00000532088 POT1Q9NUX5 634 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 MKS1Q9NXB0 559 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 CTNNAL1Q9UBT7 734 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 TBC1D29Q9UFV1 150 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 DNAJC16Q9Y2G8 782 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 ACOT9Q9Y305 439 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 ACTL7BQ9Y614 415 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 TMEM131Q92545 1883 aa12.22□□□□□ -0.45
COPB1-208ENST00000532088 SDK1Q7Z5N4 2213 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 A0A096LPK6 155 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 GOLGA6L10A6NI86 522 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 CDX4O14627 284 aaPredicted RBP12.21□□□□□ -0.45
COPB1-208ENST00000532088 SLC16A5O15375 505 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 RGS16O15492 202 aaPredicted RBP12.21□□□□□ -0.45
COPB1-208ENST00000532088 MATN4O95460 622 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 RPN2P04844 631 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 C8GP07360 202 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 MYZAPP0CAP1 466 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 BRAFP15056 766 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 XRCC1P18887 633 aaPredicted RBP12.21□□□□□ -0.45
COPB1-208ENST00000532088 SAT1P21673 171 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 CCNFP41002 786 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 C1orf61Q13536 156 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 CCDC6Q16204 474 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 TSNAXIP1Q2TAA8 658 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 PRAMEF14Q5SWL7 426 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 TCEAL6Q6IPX3 200 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 ZCCHC8Q6NZY4 707 aaKnown RBP12.21□□□□□ -0.45
COPB1-208ENST00000532088 SLC30A9Q6PML9 568 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 TMEM207Q6UWW9 146 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 CYHR1Q6ZMK1 362 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 CMC1Q7Z7K0 106 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 TBC1D1Q86TI0 1168 aaPredicted RBP12.21□□□□□ -0.45
COPB1-208ENST00000532088 TRABD2AQ86V40 505 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 SFRP1Q8N474 314 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 LILRA3Q8N6C8 439 aaPredicted RBP12.21□□□□□ -0.45
COPB1-208ENST00000532088 GPR156Q8NFN8 814 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 MAGEC3Q8TD91 643 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 RHBDD1Q8TEB9 315 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 ZDHHC1Q8WTX9 485 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 TCEAL3Q969E4 200 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 ALKBH8Q96BT7 664 aaKnown RBP12.21□□□□□ -0.45
COPB1-208ENST00000532088 EDEM2Q9BV94 578 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 WWP1Q9H0M0 922 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 IL21RQ9HBE5 538 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 NMRAL1Q9HBL8 299 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 PARD6AQ9NPB6 346 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 TMEM9BQ9NQ34 198 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 FSCN3Q9NQT6 498 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 UCKL1Q9NWZ5 548 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 TBK1Q9UHD2 729 aa12.21□□□□□ -0.45
COPB1-208ENST00000532088 MUC6Q6W4X9 2439 aa12.21□□□□□ -0.46
COPB1-208ENST00000532088 ZFC3H1O60293 1989 aaKnown RBP12.21□□□□□ -0.46
COPB1-208ENST00000532088 SMIM23A6NLE4 172 aa12.2□□□□□ -0.46
COPB1-208ENST00000532088 PDZK1P1A8MUH7 402 aa12.2□□□□□ -0.46
COPB1-208ENST00000532088 GFYI3L273 518 aa12.2□□□□□ -0.46
COPB1-208ENST00000532088 AGPSO00116 658 aa12.2□□□□□ -0.46
COPB1-208ENST00000532088 FLRT2O43155 660 aa12.2□□□□□ -0.46
COPB1-208ENST00000532088 PHGDHO43175 533 aaKnown RBP12.2□□□□□ -0.46
COPB1-208ENST00000532088 SDC3O75056 442 aa12.2□□□□□ -0.46
COPB1-208ENST00000532088 PSIP1O75475 530 aaKnown RBP12.2□□□□□ -0.46
COPB1-208ENST00000532088 KLHL2O95198 593 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms