RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 SYNDIG1Q9H7V2 258 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 TPSG1Q9NRR2 321 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 KLC4Q9NSK0 619 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 SMOXQ9NWM0 555 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 PKP3Q9Y446 797 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 PCDHGA3Q9Y5H0 932 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 FLNAP21333 2647 aaKnown RBP8.29□□□□□ -1.08
SSBP3-212ENST00000528930 IGHV1OR21-1A0A087WYE8 117 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 C2orf81A6NN90 581 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 RHPN2P1A8MT19 583 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 FAM229AH3BQW9 127 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 KMOO15229 486 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 ATP8B1O43520 1251 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 CPNE6O95741 557 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 AP2A1O95782 977 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 F3P13726 295 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 ETS1P14921 441 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 ZNF7P17097 686 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-212ENST00000528930 ALDH4A1P30038 563 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 GPR3P46089 330 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 ZNF140P52738 457 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-212ENST00000528930 CTSCP53634 463 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 CBX1P83916 185 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 LTBQ06643 244 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 SQSTM1Q13501 440 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 ITGA9Q13797 1035 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 CCNG2Q16589 344 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 NKAPLQ5M9Q1 402 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 LDLRAP1Q5SW96 308 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 GPRC6AQ5T6X5 926 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 TMEM164Q5U3C3 297 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 DRICH1Q6PGQ1 229 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-212ENST00000528930 CRTC3Q6UUV7 619 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 MICALCLQ6ZW33 695 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 REXO1L1PQ8IX06 675 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 CACNA2D3Q8IZS8 1091 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 TAB3Q8N5C8 712 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-212ENST00000528930 RASGEF1AQ8N9B8 481 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 Q8NA96 180 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 TIMM29Q9BSF4 260 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 ASB8Q9H765 288 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 LRRC40Q9H9A6 602 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 RDH14Q9HBH5 336 aa8.28□□□□□ -1.08
SSBP3-212ENST00000528930 SARS2Q9NP81 518 aaKnown RBP8.28□□□□□ -1.08
SSBP3-212ENST00000528930 SCHIP1Q9P0W5 487 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-212ENST00000528930 FEZ2Q9UHY8 353 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-212ENST00000528930 DRG1Q9Y295 367 aaKnown RBP8.28□□□□□ -1.08
SSBP3-212ENST00000528930 CACNA1CQ13936 2221 aa8.27□□□□□ -1.08
SSBP3-212ENST00000528930 OR5K4A6NMS3 321 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 H7C0S8 307 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 CCL22O00626 93 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 PSMD3O43242 534 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 SGTAO43765 313 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 NRDCO43847 1150 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 SNX2O60749 519 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 RFPL1O75677 317 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 SRP72O76094 671 aaKnown RBP8.27□□□□□ -1.09
SSBP3-212ENST00000528930 SUN1O94901 812 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 PRAMEF1O95521 474 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 CRTAMO95727 393 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 IFNB1P01574 187 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 FGGP02679 453 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 BRAFP15056 766 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 TPH1P17752 444 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 XRCC1P18887 633 aaPredicted RBP8.27□□□□□ -1.09
SSBP3-212ENST00000528930 PSMA3P25788 255 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 GRIA1P42261 906 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 PER3P56645 1201 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 UBE2IP63279 158 aaKnown RBP8.27□□□□□ -1.09
SSBP3-212ENST00000528930 TMPRSS15P98073 1019 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 PDE1BQ01064 536 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 HHEXQ03014 270 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 SNX1Q13596 522 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 TERF2Q15554 542 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 CLPPQ16740 277 aaPredicted RBP8.27□□□□□ -1.09
SSBP3-212ENST00000528930 INSCQ1MX18 579 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 AMZ1Q400G9 498 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 NKAIN2Q5VXU1 208 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 TMEM220Q6QAJ8 160 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 ABRAXAS1Q6UWZ7 409 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 PIM3Q86V86 326 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 ZNF761Q86XN6 746 aaPredicted RBP8.27□□□□□ -1.09
SSBP3-212ENST00000528930 KRT222Q8N1A0 295 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 GDAP1Q8TB36 358 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 DNAJC1Q96KC8 554 aaKnown RBP8.27□□□□□ -1.09
SSBP3-212ENST00000528930 CMKLR1Q99788 373 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 NUDT22Q9BRQ3 303 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 KCNF1Q9H3M0 494 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 DLL4Q9NR61 685 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 PIH1D1Q9NWS0 290 aaKnown RBP8.27□□□□□ -1.09
SSBP3-212ENST00000528930 ZNF624Q9P2J8 865 aaPredicted RBP8.27□□□□□ -1.09
SSBP3-212ENST00000528930 TLK1Q9UKI8 766 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 ZNF148Q9UQR1 794 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 DNAJC16Q9Y2G8 782 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 KLF2Q9Y5W3 355 aaPredicted RBP8.27□□□□□ -1.09
SSBP3-212ENST00000528930 ABCA4P78363 2273 aa8.27□□□□□ -1.09
SSBP3-212ENST00000528930 MYO7BQ6PIF6 2116 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 TRBV5-4A0A0C4DH59 114 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 KIR2DS5A0A0G2JLQ3 304 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 A0A0G2JNG1 304 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms