RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 AFTPHQ6ULP2 937 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 UNC5AQ6ZN44 842 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 CAND1Q86VP6 1230 aaKnown RBP9.07□□□□□ -0.96
HDAC3-215ENST00000519474 AMIGO1Q86WK6 493 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 PPP1R3BQ86XI6 285 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 VRK3Q8IV63 474 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 TBC1D21Q8IYX1 336 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 SLC35F6Q8N357 371 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 ESX1Q8N693 406 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 GALNT6Q8NCL4 622 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 OR5AR1Q8NGP9 310 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 COG1Q8WTW3 980 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.07□□□□□ -0.96
HDAC3-215ENST00000519474 ZNF501Q96CX3 271 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-215ENST00000519474 MFSD3Q96ES6 412 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 MED8Q96G25 268 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 ULBP3Q9BZM4 244 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 IL22Q9GZX6 179 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 TWSG1Q9GZX9 223 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 GPN2Q9H9Y4 310 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-215ENST00000519474 PDE7BQ9NP56 450 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 C1GALT1Q9NS00 363 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 KCND1Q9NSA2 647 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 TRMT1Q9NXH9 659 aaKnown RBP9.07□□□□□ -0.96
HDAC3-215ENST00000519474 ANAPC5Q9UJX4 755 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 POMT2Q9UKY4 750 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 RARRES3Q9UL19 164 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 PADI1Q9ULC6 663 aa9.07□□□□□ -0.96
HDAC3-215ENST00000519474 BTN3A1O00481 513 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 DYNC1I1O14576 645 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 ZNF185O15231 689 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 SLCO2B1O94956 709 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 VAPBO95292 243 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 FTH1P02794 183 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 NTRK1P04629 796 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 ST6GAL1P15907 406 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 TPSB2P20231 275 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 AOAHP28039 575 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 CASQ1P31415 396 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 PPARGP37231 505 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-215ENST00000519474 STAT5AP42229 794 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 CSE1LP55060 971 aaKnown RBP9.06□□□□□ -0.96
HDAC3-215ENST00000519474 ABRQ12979 859 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 GPS1Q13098 491 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 PRKAA1Q13131 559 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 KCNJ11Q14654 390 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 TPSAB1Q15661 275 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 GPR19Q15760 415 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 PRAMEF17Q5VTA0 474 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 ANKRD22Q5VYY1 191 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 FAM199XQ6PEV8 388 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-215ENST00000519474 ANKRD13BQ86YJ7 626 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 CARFQ8N187 725 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 KRT222Q8N1A0 295 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 MPP5Q8N3R9 675 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 SLC38A9Q8NBW4 561 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 PPHLN1Q8NEY8 458 aaKnown RBP9.06□□□□□ -0.96
HDAC3-215ENST00000519474 FLVCR1-AS1Q8TAF5 88 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 LKAAEAR1Q8TD35 194 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 CPT1BQ92523 772 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 TRAPPC9Q96Q05 1148 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 OSBPL9Q96SU4 736 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 EFHD1Q9BUP0 239 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 P2RY12Q9H244 342 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 MRM3Q9HC36 420 aaKnown RBP9.06□□□□□ -0.96
HDAC3-215ENST00000519474 LHX9Q9NQ69 397 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 CATSPERZQ9NTU4 200 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 SYBUQ9NX95 663 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 POLG2Q9UHN1 485 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 SOX13Q9UN79 622 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 ICKQ9UPZ9 632 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 ASF1AQ9Y294 204 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 BTRCQ9Y297 605 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 MRPS18BQ9Y676 258 aaKnown RBP9.06□□□□□ -0.96
HDAC3-215ENST00000519474 ZFYVE26Q68DK2 2539 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 BPTFQ12830 3046 aa9.06□□□□□ -0.96
HDAC3-215ENST00000519474 MAGEB16A2A368 324 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 ANKRD33BA6NCL7 494 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 ZNF891A8MT65 544 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-215ENST00000519474 B8ZZF3 427 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 GOLGA8KD6RF30 607 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 GOLGA8TH3BQL2 631 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 PRMT5O14744 637 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-215ENST00000519474 FURINP09958 794 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 CCNYL3P0C7X3 344 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 PVRP15151 417 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 TCN2P20062 427 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 CDH3P22223 829 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 PAX7P23759 505 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 DLSTP36957 453 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 TTPAP49638 278 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 ARL4DP49703 201 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 VPS41P49754 854 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 TUBB4BP68371 445 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 HSPA14Q0VDF9 509 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 TUBB3Q13509 450 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 TUBB2AQ13885 445 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 GRB7Q14451 532 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 KYNUQ16719 465 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 CRTC2Q53ET0 693 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms