RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 OCA2Q04671 838 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 SLC18A2Q05940 514 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 SPOCK1Q08629 439 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 LCP2Q13094 533 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 TP53BP2Q13625 1128 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 NEDD9Q14511 834 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 PRKD1Q15139 912 aaPredicted RBP3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZRSR1Q15695 479 aaKnown RBP3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 SYT16Q17RD7 645 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 C2orf68Q2NKX9 166 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 SMTNL2Q2TAL5 461 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 PLEKHO1Q53GL0 409 aaPredicted RBP3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 PRR31Q5SQ13 230 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 CCNYL2Q5T2Q4 361 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 DENND2CQ68D51 928 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 ASPGQ86U10 573 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 CCDC190Q86UF4 302 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 MISPQ8IVT2 679 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 SLC35F3Q8IY50 421 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 C1orf87Q8N0U7 546 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZNF611Q8N823 705 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 AMER3Q8N944 861 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 EXD3Q8N9H8 876 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 FADS6Q8N9I5 356 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 FAR1Q8WVX9 515 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 STARD8Q92502 1023 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 APBB2Q92870 758 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 SLCO4A1Q96BD0 722 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 ULK4Q96C45 1275 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 FBXL8Q96CD0 374 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 NRBF2Q96F24 287 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 PGBD1Q96JS3 809 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 SLC41A2Q96JW4 573 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 IFT74Q96LB3 600 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 SPATA33Q96N06 139 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZNF570Q96NI8 536 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 SLITRK1Q96PX8 696 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZNF347Q96SE7 839 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 ACOX2Q99424 681 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 SPAG8Q99932 426 aaPredicted RBP3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 GAL3ST1Q99999 423 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 SPATA25Q9BR10 227 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 MTG1Q9BT17 334 aaPredicted RBP3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 FICDQ9BVA6 458 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 CDT1Q9H211 546 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 TMEM245Q9H330 911 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 TOR3AQ9H497 397 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 RIOX1Q9H6W3 641 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 METTL7AQ9H8H3 244 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 ACTR8Q9H981 624 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 TRPC7Q9HCX4 862 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 MYNNQ9NPC7 610 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 BARHL2Q9NY43 387 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 ATXN10Q9UBB4 475 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 CNOT11Q9UKZ1 510 aaKnown RBP3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 KIAA1257Q9ULG3 409 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 KCNJ14Q9UNX9 436 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 ERVK-11Q9UQG0 969 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 PADI2Q9Y2J8 665 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 PHLPP2Q6ZVD8 1323 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 HELTA6NFD8 242 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 ANKUB1A6NFN9 424 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 ANKRD61A6NGH8 418 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 PRR19A6NJB7 356 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 GSC2O15499 205 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 PLPP2O43688 288 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 PRAF2O60831 178 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 DNAJB6O75190 326 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZNF217O75362 1048 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 ECI2O75521 394 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 ASNSP08243 561 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 PPP3CBP16298 524 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 SRD5A1P18405 259 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 YWHAQP27348 245 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 COL8A1P27658 744 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 PPP2R1AP30153 589 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 CYP2C18P33260 490 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 BMI1P35226 326 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 LONP1P36776 959 aaKnown RBP3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 NUP62P37198 522 aaPredicted RBP3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 MAGEA1P43355 309 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZNF84P51523 738 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 VAV2P52735 878 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 MTCP1P56278 107 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 NUCB2P80303 420 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 HSF2Q03933 536 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 ARHGAP1Q07960 439 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 HSPA14Q0VDF9 509 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 NFYCQ13952 458 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 LAPTM4AQ15012 233 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZNF568Q3ZCX4 644 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 PLK5Q496M5 336 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 BCL7AQ4VC05 210 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 TMEM41BQ5BJD5 291 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 PRAMEF19Q5SWL8 479 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 SIGIRRQ6IA17 410 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 KLC3Q6P597 504 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 KIRREL2Q6UWL6 708 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 DHRS13Q6UX07 377 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 B3GLCTQ6Y288 498 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms