RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 J3QKU1 62 aa22.28■■□□□ 1.16
SNF8-209ENST00000510558 PPARGP37231 505 aaPredicted RBP22.28■■□□□ 1.16
SNF8-209ENST00000510558 CRADDP78560 199 aa22.28■■□□□ 1.16
SNF8-209ENST00000510558 PLOD1Q02809 727 aaPredicted RBP22.28■■□□□ 1.16
SNF8-209ENST00000510558 KCNAB2Q13303 367 aa22.28■■□□□ 1.16
SNF8-209ENST00000510558 DNASE1L3Q13609 305 aa22.28■■□□□ 1.16
SNF8-209ENST00000510558 DEFB109BQ30KR1 87 aa22.28■■□□□ 1.16
SNF8-209ENST00000510558 AARS2Q5JTZ9 985 aaKnown RBP22.28■■□□□ 1.16
SNF8-209ENST00000510558 TMEM126BQ8IUX1 230 aa22.28■■□□□ 1.16
SNF8-209ENST00000510558 ADGRF3Q8IZF5 1079 aa22.28■■□□□ 1.16
SNF8-209ENST00000510558 PITPNM3Q9BZ71 974 aa22.28■■□□□ 1.16
SNF8-209ENST00000510558 SLC25A18Q9H1K4 315 aa22.28■■□□□ 1.16
SNF8-209ENST00000510558 LATS2Q9NRM7 1088 aa22.28■■□□□ 1.16
SNF8-209ENST00000510558 KCND1Q9NSA2 647 aa22.28■■□□□ 1.16
SNF8-209ENST00000510558 HOMER3Q9NSC5 361 aa22.28■■□□□ 1.16
SNF8-209ENST00000510558 ICKQ9UPZ9 632 aa22.28■■□□□ 1.16
SNF8-209ENST00000510558 HEMK1Q9Y5R4 338 aaPredicted RBP22.28■■□□□ 1.16
SNF8-209ENST00000510558 SPTA1P02549 2419 aa22.28■■□□□ 1.16
SNF8-209ENST00000510558 BHMG1C9JSJ3 638 aaPredicted RBP22.27■■□□□ 1.16
SNF8-209ENST00000510558 SLC28A2O43868 658 aa22.27■■□□□ 1.16
SNF8-209ENST00000510558 CPNE3O75131 537 aaKnown RBP22.27■■□□□ 1.16
SNF8-209ENST00000510558 SCRG1O75711 98 aa22.27■■□□□ 1.16
SNF8-209ENST00000510558 ST6GAL1P15907 406 aa22.27■■□□□ 1.16
SNF8-209ENST00000510558 PRICKLE2Q7Z3G6 844 aa22.27■■□□□ 1.16
SNF8-209ENST00000510558 TBC1D21Q8IYX1 336 aa22.27■■□□□ 1.16
SNF8-209ENST00000510558 PRELID2Q8N945 189 aa22.27■■□□□ 1.16
SNF8-209ENST00000510558 IL22Q9GZX6 179 aa22.27■■□□□ 1.16
SNF8-209ENST00000510558 FANCEQ9HB96 536 aa22.27■■□□□ 1.16
SNF8-209ENST00000510558 CATSPERZQ9NTU4 200 aa22.27■■□□□ 1.16
SNF8-209ENST00000510558 ACTR10Q9NZ32 417 aa22.27■■□□□ 1.16
SNF8-209ENST00000510558 TUBD1Q9UJT1 453 aa22.27■■□□□ 1.16
SNF8-209ENST00000510558 ANAPC5Q9UJX4 755 aa22.27■■□□□ 1.16
SNF8-209ENST00000510558 PCDHGA6Q9Y5G7 932 aa22.27■■□□□ 1.16
SNF8-209ENST00000510558 C21orf140B9A014 251 aa22.26■■□□□ 1.15
SNF8-209ENST00000510558 AP3B1O00203 1094 aa22.26■■□□□ 1.15
SNF8-209ENST00000510558 SHMT2P34897 504 aa22.26■■□□□ 1.15
SNF8-209ENST00000510558 NPY2RP49146 381 aa22.26■■□□□ 1.15
SNF8-209ENST00000510558 CSE1LP55060 971 aaKnown RBP22.26■■□□□ 1.15
SNF8-209ENST00000510558 NFKB2Q00653 900 aa22.26■■□□□ 1.15
SNF8-209ENST00000510558 KCTD19Q17RG1 926 aaPredicted RBP22.26■■□□□ 1.15
SNF8-209ENST00000510558 LDB1Q86U70 411 aaPredicted RBP22.26■■□□□ 1.15
SNF8-209ENST00000510558 OR5K2Q8NHB8 316 aa22.26■■□□□ 1.15
SNF8-209ENST00000510558 LKAAEAR1Q8TD35 194 aa22.26■■□□□ 1.15
SNF8-209ENST00000510558 APOBEC4Q8WW27 367 aaKnown RBP22.26■■□□□ 1.15
SNF8-209ENST00000510558 TSSK1BQ9BXA7 367 aa22.26■■□□□ 1.15
SNF8-209ENST00000510558 AKIRIN1Q9H9L7 192 aaPredicted RBP22.26■■□□□ 1.15
SNF8-209ENST00000510558 TREX1Q9NSU2 369 aa22.26■■□□□ 1.15
SNF8-209ENST00000510558 BFARQ9NZS9 450 aa22.26■■□□□ 1.15
SNF8-209ENST00000510558 MARCH4Q9P2E8 410 aaPredicted RBP22.26■■□□□ 1.15
SNF8-209ENST00000510558 POLG2Q9UHN1 485 aa22.26■■□□□ 1.15
SNF8-209ENST00000510558 TDRKHQ9Y2W6 561 aaKnown RBP22.26■■□□□ 1.15
SNF8-209ENST00000510558 SNRNP200O75643 2136 aaKnown RBP22.25■■□□□ 1.15
SNF8-209ENST00000510558 PIPSLA2A3N6 862 aa22.25■■□□□ 1.15
SNF8-209ENST00000510558 PVRP15151 417 aa22.25■■□□□ 1.15
SNF8-209ENST00000510558 CCR7P32248 378 aa22.25■■□□□ 1.15
SNF8-209ENST00000510558 CDK16Q00536 496 aa22.25■■□□□ 1.15
SNF8-209ENST00000510558 ERV3-1Q14264 604 aa22.25■■□□□ 1.15
SNF8-209ENST00000510558 FAM199XQ6PEV8 388 aaPredicted RBP22.25■■□□□ 1.15
SNF8-209ENST00000510558 UNC5AQ6ZN44 842 aa22.25■■□□□ 1.15
SNF8-209ENST00000510558 TRAPPC9Q96Q05 1148 aa22.25■■□□□ 1.15
SNF8-209ENST00000510558 CARD6Q9BX69 1037 aa22.25■■□□□ 1.15
SNF8-209ENST00000510558 KLHL25Q9H0H3 589 aa22.25■■□□□ 1.15
SNF8-209ENST00000510558 SYTL2Q9HCH5 934 aa22.25■■□□□ 1.15
SNF8-209ENST00000510558 TTC7AQ9ULT0 858 aaPredicted RBP22.25■■□□□ 1.15
SNF8-209ENST00000510558 BOD1L1Q8NFC6 3051 aa22.25■■□□□ 1.15
SNF8-209ENST00000510558 IQCF5A8MTL0 148 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 PRMT5O14744 637 aaPredicted RBP22.24■■□□□ 1.15
SNF8-209ENST00000510558 CD3EAPO15446 510 aaKnown RBP22.24■■□□□ 1.15
SNF8-209ENST00000510558 MAP3K7O43318 606 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 CREG1O75629 220 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 FURINP09958 794 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 MSL3P1P0C860 447 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 TPSB2P20231 275 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 MGAT1P26572 445 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 NMBRP28336 390 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 TTPAP49638 278 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 ABRQ12979 859 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 GPS2Q13227 327 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 TRIP13Q15645 432 aaPredicted RBP22.24■■□□□ 1.15
SNF8-209ENST00000510558 TPSAB1Q15661 275 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 PRAMEF17Q5VTA0 474 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 SPESP1Q6UW49 350 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 SLC22A15Q8IZD6 547 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 RUFY1Q96T51 708 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 AP1M1Q9BXS5 423 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 CDYLQ9Y232 598 aa22.24■■□□□ 1.15
SNF8-209ENST00000510558 TCRBV7S3A2A0A539 114 aa22.23■■□□□ 1.15
SNF8-209ENST00000510558 TMEM150CB9EJG8 249 aa22.23■■□□□ 1.15
SNF8-209ENST00000510558 TPBGLP0DKB5 382 aa22.23■■□□□ 1.15
SNF8-209ENST00000510558 UGT2B7P16662 529 aa22.23■■□□□ 1.15
SNF8-209ENST00000510558 HSPA14Q0VDF9 509 aa22.23■■□□□ 1.15
SNF8-209ENST00000510558 DNAJC21Q5F1R6 531 aaKnown RBP22.23■■□□□ 1.15
SNF8-209ENST00000510558 LRRC8BQ6P9F7 803 aa22.23■■□□□ 1.15
SNF8-209ENST00000510558 TRIM73Q86UV7 250 aa22.23■■□□□ 1.15
SNF8-209ENST00000510558 HOOK3Q86VS8 718 aa22.23■■□□□ 1.15
SNF8-209ENST00000510558 VRK3Q8IV63 474 aa22.23■■□□□ 1.15
SNF8-209ENST00000510558 SLC38A9Q8NBW4 561 aa22.23■■□□□ 1.15
SNF8-209ENST00000510558 OR1L3Q8NH93 324 aa22.23■■□□□ 1.15
SNF8-209ENST00000510558 ASZ1Q8WWH4 475 aa22.23■■□□□ 1.15
SNF8-209ENST00000510558 CPT1BQ92523 772 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms