RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 LDB1Q86U70 411 aaPredicted RBP10.59□□□□□ -0.71
RNF4-212ENST00000509258 TMEM151BQ8IW70 566 aa10.59□□□□□ -0.71
RNF4-212ENST00000509258 D2HGDHQ8N465 521 aa10.59□□□□□ -0.71
RNF4-212ENST00000509258 EFCAB3Q8N7B9 438 aa10.59□□□□□ -0.71
RNF4-212ENST00000509258 STYXQ8WUJ0 223 aa10.59□□□□□ -0.71
RNF4-212ENST00000509258 HEXDCQ8WVB3 486 aa10.59□□□□□ -0.71
RNF4-212ENST00000509258 ZNF501Q96CX3 271 aaPredicted RBP10.59□□□□□ -0.71
RNF4-212ENST00000509258 DCUN1D1Q96GG9 259 aa10.59□□□□□ -0.71
RNF4-212ENST00000509258 PPP1R2P1Q96PQ5 205 aa10.59□□□□□ -0.71
RNF4-212ENST00000509258 C19orf43Q9BQ61 176 aa10.59□□□□□ -0.71
RNF4-212ENST00000509258 CCM2Q9BSQ5 444 aa10.59□□□□□ -0.71
RNF4-212ENST00000509258 KLHL25Q9H0H3 589 aa10.59□□□□□ -0.71
RNF4-212ENST00000509258 LRRC4CQ9HCJ2 640 aa10.59□□□□□ -0.71
RNF4-212ENST00000509258 FGF21Q9NSA1 209 aa10.59□□□□□ -0.71
RNF4-212ENST00000509258 FEZ2Q9UHY8 353 aaPredicted RBP10.59□□□□□ -0.71
RNF4-212ENST00000509258 POMT2Q9UKY4 750 aa10.59□□□□□ -0.71
RNF4-212ENST00000509258 VPS4AQ9UN37 437 aa10.59□□□□□ -0.71
RNF4-212ENST00000509258 HEBP2Q9Y5Z4 205 aa10.59□□□□□ -0.71
RNF4-212ENST00000509258 MYO9AB2RTY4 2548 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 GOLGA6L9A6NEM1 432 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 SLC9B1P1A6NJY1 282 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 TTLL8A6PVC2 850 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 BHMG1C9JSJ3 638 aaPredicted RBP10.58□□□□□ -0.72
RNF4-212ENST00000509258 CFAP99D6REC4 459 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 DNAJB5O75953 348 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 SUN1O94901 812 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 ZBTB11O95625 1053 aaPredicted RBP10.58□□□□□ -0.72
RNF4-212ENST00000509258 IFNB1P01574 187 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 PTMAP06454 111 aaKnown RBP10.58□□□□□ -0.72
RNF4-212ENST00000509258 CTSBP07858 339 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 ST6GAL1P15907 406 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 MSNP26038 577 aaKnown RBP10.58□□□□□ -0.72
RNF4-212ENST00000509258 PTPN4P29074 926 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 RPL22P35268 128 aaKnown RBP10.58□□□□□ -0.72
RNF4-212ENST00000509258 HADHAP40939 763 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 PGDP52209 483 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 CRADDP78560 199 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 HSD11B2P80365 405 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 CCZ1BP86790 482 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 CCZ1P86791 482 aaPredicted RBP10.58□□□□□ -0.72
RNF4-212ENST00000509258 CACNG1Q06432 222 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 GPS2Q13227 327 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 PRKG2Q13237 762 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 BOP1Q14137 746 aaKnown RBP10.58□□□□□ -0.72
RNF4-212ENST00000509258 BRD3Q15059 726 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 UGT8Q16880 541 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 P3H1Q32P28 736 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 GPR33Q49SQ1 333 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 TRIM73Q86UV7 250 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 TMEM126BQ8IUX1 230 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 VRK3Q8IV63 474 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 ADGRF3Q8IZF5 1079 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 RNF10Q8N5U6 811 aaKnown RBP10.58□□□□□ -0.72
RNF4-212ENST00000509258 GALNT11Q8NCW6 608 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 OR52E1Q8NGJ3 308 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 OR5AR1Q8NGP9 310 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 FLVCR1-AS1Q8TAF5 88 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 HDAC10Q969S8 669 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 FERD3LQ96RJ6 166 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 HGH1Q9BTY7 390 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 TLR10Q9BXR5 811 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 VPS37BQ9H9H4 285 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 SYTL2Q9HCH5 934 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 CASS4Q9NQ75 786 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 ACSS2Q9NR19 701 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 SOHLH2Q9NX45 425 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 SMARCAL1Q9NZC9 954 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 MARCH4Q9P2E8 410 aaPredicted RBP10.58□□□□□ -0.72
RNF4-212ENST00000509258 PLAGL1Q9UM63 463 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 ICKQ9UPZ9 632 aa10.58□□□□□ -0.72
RNF4-212ENST00000509258 PCDHGA9Q9Y5G4 932 aaKnown RBP10.58□□□□□ -0.72
RNF4-212ENST00000509258 C17orf113A0A1B0GUU1 675 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 AGFG2O95081 481 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 GOT2P00505 430 aaKnown RBP10.57□□□□□ -0.72
RNF4-212ENST00000509258 PDGFAP04085 211 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 ACADLP28330 430 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 PEBP1P30086 187 aaKnown RBP10.57□□□□□ -0.72
RNF4-212ENST00000509258 UQCRFS1P47985 274 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 KCNJ1P48048 391 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 CSE1LP55060 971 aaKnown RBP10.57□□□□□ -0.72
RNF4-212ENST00000509258 GSDMDP57764 484 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 TUBB4BP68371 445 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 IL10RAQ13651 578 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 TUBB2AQ13885 445 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 ZIC1Q15915 447 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 C4orf17Q53FE4 359 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 TSTD2Q5T7W7 516 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 SEL1L2Q5TEA6 688 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 FAM20CQ8IXL6 584 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 ACVR1CQ8NER5 493 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 OR1L3Q8NH93 324 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 CPT1CQ8TCG5 803 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 SLC25A23Q9BV35 468 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 TUBB2BQ9BVA1 445 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 TRIM55Q9BYV6 548 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 SLC7A5P2Q9GIP4 190 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 FAM60AQ9NP50 221 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 LZTFL1Q9NQ48 299 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 LATS2Q9NRM7 1088 aa10.57□□□□□ -0.72
RNF4-212ENST00000509258 RAB6BQ9NRW1 208 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms