RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 BTN3A1O00481 513 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 DNALI1O14645 258 aaPredicted RBP21.97■■□□□ 1.11
SNIP1-203ENST00000493916 FANCGO15287 622 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 STK17BO94768 372 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 SLCO2B1O94956 709 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 ZBTB11O95625 1053 aaPredicted RBP21.97■■□□□ 1.11
SNIP1-203ENST00000493916 DLGAP3O95886 979 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 FGF5P12034 268 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 HSD11B2P80365 405 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 HSPA14Q0VDF9 509 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 PRKG2Q13237 762 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 DHX34Q14147 1143 aaKnown RBP21.97■■□□□ 1.11
SNIP1-203ENST00000493916 MAP7Q14244 749 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 NEPROQ6NW34 567 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 PCGF5Q86SE9 256 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 HOOK3Q86VS8 718 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 CILP2Q8IUL8 1156 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 CACNA2D3Q8IZS8 1091 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 NLGN4XQ8N0W4 816 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 KRT222Q8N1A0 295 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 D2HGDHQ8N465 521 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 NLGN4YQ8NFZ3 816 aaPredicted RBP21.97■■□□□ 1.11
SNIP1-203ENST00000493916 ZNF669Q96BR6 464 aaPredicted RBP21.97■■□□□ 1.11
SNIP1-203ENST00000493916 SIGLEC10Q96LC7 697 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 BIRC8Q96P09 236 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 WDR70Q9NW82 654 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 RNF14Q9UBS8 474 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 ICKQ9UPZ9 632 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 RPS6KL1Q9Y6S9 549 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 GSAPA4D1B5 854 aa21.96■■□□□ 1.11
SNIP1-203ENST00000493916 H3BMM5 538 aa21.96■■□□□ 1.11
SNIP1-203ENST00000493916 BTN3A3O00478 584 aa21.96■■□□□ 1.11
SNIP1-203ENST00000493916 KPNA5O15131 536 aa21.96■■□□□ 1.11
SNIP1-203ENST00000493916 USP1O94782 785 aa21.96■■□□□ 1.11
SNIP1-203ENST00000493916 MAP4P27816 1152 aaKnown RBP21.96■■□□□ 1.11
SNIP1-203ENST00000493916 SHMT2P34897 504 aa21.96■■□□□ 1.11
SNIP1-203ENST00000493916 CSE1LP55060 971 aaKnown RBP21.96■■□□□ 1.11
SNIP1-203ENST00000493916 EIF3BP55884 814 aaKnown RBP21.96■■□□□ 1.11
SNIP1-203ENST00000493916 RHDQ02161 417 aa21.96■■□□□ 1.11
SNIP1-203ENST00000493916 ACY1Q03154 408 aa21.96■■□□□ 1.11
SNIP1-203ENST00000493916 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.96■■□□□ 1.11
SNIP1-203ENST00000493916 CTSL3PQ5NE16 218 aa21.96■■□□□ 1.11
SNIP1-203ENST00000493916 VRK3Q8IV63 474 aa21.96■■□□□ 1.11
SNIP1-203ENST00000493916 ADGRF3Q8IZF5 1079 aa21.96■■□□□ 1.11
SNIP1-203ENST00000493916 PDE7BQ9NP56 450 aa21.96■■□□□ 1.11
SNIP1-203ENST00000493916 C1GALT1Q9NS00 363 aa21.96■■□□□ 1.11
SNIP1-203ENST00000493916 INTS10Q9NVR2 710 aaKnown RBP21.96■■□□□ 1.11
SNIP1-203ENST00000493916 BTRCQ9Y297 605 aa21.96■■□□□ 1.11
SNIP1-203ENST00000493916 VPS9D1Q9Y2B5 631 aa21.96■■□□□ 1.11
SNIP1-203ENST00000493916 ATMQ13315 3056 aa21.95■■□□□ 1.11
SNIP1-203ENST00000493916 C2orf74A8MZ97 194 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 CCDC188H7C350 402 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 KDM1AO60341 852 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 ESR1P03372 595 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 FOLR1P15328 257 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 IVDP26440 423 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 PAFAH1B1P43034 410 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 ARL4DP49703 201 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 DR1Q01658 176 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 TUBB3Q13509 450 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 SOWAHCQ53LP3 525 aaPredicted RBP21.95■■□□□ 1.1
SNIP1-203ENST00000493916 UNC5DQ6UXZ4 953 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 TIPARPQ7Z3E1 657 aaKnown RBP21.95■■□□□ 1.1
SNIP1-203ENST00000493916 BPHLQ86WA6 291 aaPredicted RBP21.95■■□□□ 1.1
SNIP1-203ENST00000493916 PPP1R3BQ86XI6 285 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 IL22RA1Q8N6P7 574 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 NRTNQ99748 197 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 PITPNM3Q9BZ71 974 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 ULBP3Q9BZM4 244 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 TWSG1Q9GZX9 223 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 XKR8Q9H6D3 395 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 PCDHGA4Q9Y5G9 962 aa21.95■■□□□ 1.1
SNIP1-203ENST00000493916 ERVH48-1M5A8F1 160 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 RPN2P04844 631 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 EBLN1P0CF75 366 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 TPBGLP0DKB5 382 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 PRDX3P30048 256 aaKnown RBP21.94■■□□□ 1.1
SNIP1-203ENST00000493916 KCNAB1Q14722 419 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 PLEKHS1Q5SXH7 462 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 IZUMO3Q5VZ72 239 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 ZNF470Q6ECI4 717 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 CENPUQ71F23 418 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 OTOAQ7RTW8 1153 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 KLHL7Q8IXQ5 586 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 STAMBPL1Q96FJ0 436 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 PPM1MQ96MI6 270 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 FCRL4Q96PJ5 515 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 ACTR10Q9NZ32 417 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 IL1RAPL1Q9NZN1 696 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 OR6C2Q9NZP2 312 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 RARRES3Q9UL19 164 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 MAD1L1Q9Y6D9 718 aa21.94■■□□□ 1.1
SNIP1-203ENST00000493916 ATXN7O15265 892 aaPredicted RBP21.93■■□□□ 1.1
SNIP1-203ENST00000493916 SPAG6O75602 509 aa21.93■■□□□ 1.1
SNIP1-203ENST00000493916 ZNF28P17035 718 aa21.93■■□□□ 1.1
SNIP1-203ENST00000493916 WT1P19544 449 aaPredicted RBP21.93■■□□□ 1.1
SNIP1-203ENST00000493916 CDH3P22223 829 aa21.93■■□□□ 1.1
SNIP1-203ENST00000493916 FMO4P31512 558 aa21.93■■□□□ 1.1
SNIP1-203ENST00000493916 TUBB4BP68371 445 aa21.93■■□□□ 1.1
SNIP1-203ENST00000493916 ABHD18Q0P651 414 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms