RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 QSOX1O00391 747 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 LIN7AO14910 233 aaPredicted RBP17.82■□□□□ 0.44
SMIM4-205ENST00000491607 FTH1P02794 183 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 CDH17Q12864 832 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 CHAF1BQ13112 559 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 SYTL3Q4VX76 610 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 PLEKHS1Q5SXH7 462 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 CPZQ66K79 652 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 LCN10Q6JVE6 187 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 PPP1R21Q6ZMI0 780 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 ZNF517Q6ZMY9 492 aaPredicted RBP17.82■□□□□ 0.44
SMIM4-205ENST00000491607 ADGRF3Q8IZF5 1079 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 DSELQ8IZU8 1212 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 ENDOVQ8N8Q3 282 aaKnown RBP17.82■□□□□ 0.44
SMIM4-205ENST00000491607 SPC24Q8NBT2 197 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 OR5AR1Q8NGP9 310 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 HES6Q96HZ4 224 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 LRFN5Q96NI6 719 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 TRAPPC9Q96Q05 1148 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 PITPNM3Q9BZ71 974 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 ACSS2Q9NR19 701 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 ACTR10Q9NZ32 417 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 SERTAD3Q9UJW9 196 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 ASF1AQ9Y294 204 aa17.82■□□□□ 0.44
SMIM4-205ENST00000491607 CCDC162PA2VCL2 907 aa17.81■□□□□ 0.44
SMIM4-205ENST00000491607 IFNB1P01574 187 aa17.81■□□□□ 0.44
SMIM4-205ENST00000491607 PDGFAP04085 211 aa17.81■□□□□ 0.44
SMIM4-205ENST00000491607 OR56A5P0C7T3 313 aa17.81■□□□□ 0.44
SMIM4-205ENST00000491607 LAMB3Q13751 1172 aa17.81■□□□□ 0.44
SMIM4-205ENST00000491607 ITIH4Q14624 930 aa17.81■□□□□ 0.44
SMIM4-205ENST00000491607 ZNF789Q5FWF6 425 aa17.81■□□□□ 0.44
SMIM4-205ENST00000491607 SEL1L2Q5TEA6 688 aa17.81■□□□□ 0.44
SMIM4-205ENST00000491607 NAPRTQ6XQN6 538 aa17.81■□□□□ 0.44
SMIM4-205ENST00000491607 N4BP2L2Q92802 583 aaPredicted RBP17.81■□□□□ 0.44
SMIM4-205ENST00000491607 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.81■□□□□ 0.44
SMIM4-205ENST00000491607 PCMTD2Q9NV79 361 aa17.81■□□□□ 0.44
SMIM4-205ENST00000491607 ICKQ9UPZ9 632 aa17.81■□□□□ 0.44
SMIM4-205ENST00000491607 PLAAQ9Y263 795 aa17.81■□□□□ 0.44
SMIM4-205ENST00000491607 TDRKHQ9Y2W6 561 aaKnown RBP17.81■□□□□ 0.44
SMIM4-205ENST00000491607 SPENQ96T58 3664 aaKnown RBP17.8■□□□□ 0.44
SMIM4-205ENST00000491607 HEATR9A2RTY3 570 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 ERI2A8K979 691 aaKnown RBP17.8■□□□□ 0.44
SMIM4-205ENST00000491607 E7EQ34 232 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 LIASO43766 372 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 RAB40ALP0C0E4 278 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 STIP1P31948 543 aaKnown RBP17.8■□□□□ 0.44
SMIM4-205ENST00000491607 FOXN2P32314 431 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 SHMT2P34897 504 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 RORAP35398 523 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 CCL11P51671 97 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 MLLT10P55197 1068 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 ITGA1P56199 1179 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 PTCHD3Q3KNS1 767 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 FAM69BQ5VUD6 431 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 SPESP1Q6UW49 350 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 PACS1Q6VY07 963 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 CDHR3Q6ZTQ4 885 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 TRIM73Q86UV7 250 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 GAS2L3Q86XJ1 694 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 SYTL1Q8IYJ3 562 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 TTC1Q99614 292 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 SLC25A23Q9BV35 468 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 NLNQ9BYT8 704 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 ING2Q9H160 280 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 ETNK1Q9HBU6 452 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 IMPACTQ9P2X3 320 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 TCFL5Q9UL49 500 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 ZNF148Q9UQR1 794 aa17.8■□□□□ 0.44
SMIM4-205ENST00000491607 ZNF749O43361 778 aa17.79■□□□□ 0.44
SMIM4-205ENST00000491607 MSL3P1P0C860 447 aa17.79■□□□□ 0.44
SMIM4-205ENST00000491607 UGT2B7P16662 529 aa17.79■□□□□ 0.44
SMIM4-205ENST00000491607 FDFT1P37268 417 aa17.79■□□□□ 0.44
SMIM4-205ENST00000491607 PTGIRP43119 386 aa17.79■□□□□ 0.44
SMIM4-205ENST00000491607 PGDP52209 483 aa17.79■□□□□ 0.44
SMIM4-205ENST00000491607 CSE1LP55060 971 aaKnown RBP17.79■□□□□ 0.44
SMIM4-205ENST00000491607 LYPLAL1Q5VWZ2 237 aa17.79■□□□□ 0.44
SMIM4-205ENST00000491607 UNC5AQ6ZN44 842 aa17.79■□□□□ 0.44
SMIM4-205ENST00000491607 TBC1D21Q8IYX1 336 aa17.79■□□□□ 0.44
SMIM4-205ENST00000491607 GPR135Q8IZ08 494 aa17.79■□□□□ 0.44
SMIM4-205ENST00000491607 C19orf47Q8N9M1 422 aaKnown RBP17.79■□□□□ 0.44
SMIM4-205ENST00000491607 OR13J1Q8NGT2 312 aa17.79■□□□□ 0.44
SMIM4-205ENST00000491607 C1orf54Q8WWF1 131 aa17.79■□□□□ 0.44
SMIM4-205ENST00000491607 HDAC10Q969S8 669 aa17.79■□□□□ 0.44
SMIM4-205ENST00000491607 SLC2A6Q9UGQ3 507 aa17.79■□□□□ 0.44
SMIM4-205ENST00000491607 POLG2Q9UHN1 485 aa17.79■□□□□ 0.44
SMIM4-205ENST00000491607 OR1I1O60431 355 aa17.78■□□□□ 0.44
SMIM4-205ENST00000491607 GOT2P00505 430 aaKnown RBP17.78■□□□□ 0.44
SMIM4-205ENST00000491607 ATXN8OSP0DMR3 200 aa17.78■□□□□ 0.44
SMIM4-205ENST00000491607 AGXTP21549 392 aa17.78■□□□□ 0.44
SMIM4-205ENST00000491607 PSMA3P25788 255 aa17.78■□□□□ 0.44
SMIM4-205ENST00000491607 ACADLP28330 430 aa17.78■□□□□ 0.44
SMIM4-205ENST00000491607 GRIA1P42261 906 aa17.78■□□□□ 0.44
SMIM4-205ENST00000491607 SNX1Q13596 522 aa17.78■□□□□ 0.44
SMIM4-205ENST00000491607 OASLQ15646 514 aaKnown RBP17.78■□□□□ 0.44
SMIM4-205ENST00000491607 DEFB110Q30KQ9 67 aa17.78■□□□□ 0.44
SMIM4-205ENST00000491607 TSTD2Q5T7W7 516 aa17.78■□□□□ 0.44
SMIM4-205ENST00000491607 AFTPHQ6ULP2 937 aa17.78■□□□□ 0.44
SMIM4-205ENST00000491607 FAM198BQ6UWH4 519 aa17.78■□□□□ 0.44
SMIM4-205ENST00000491607 PRUNE1Q86TP1 453 aa17.78■□□□□ 0.44
SMIM4-205ENST00000491607 ATCAYQ86WG3 371 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms