RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 Q96MT0 163 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 FYTTD1Q96QD9 318 aaKnown RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 OR2A14Q96R47 310 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 APOL4Q9BPW4 351 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 ULBP1Q9BZM6 244 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 OR51E2Q9H255 320 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 RANGRFQ9HD47 186 aaPredicted RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 TOR4AQ9NXH8 423 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 GALPQ9UBC7 116 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 RAPGEFL1Q9UHV5 662 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 ITM2BQ9Y287 266 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 KCTD3Q9Y597 815 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 MEIOCA2RUB1 952 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 NCF1BA6NI72 391 aaPredicted RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 ASB14A6NK59 587 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 NCF1CA8MVU1 366 aaPredicted RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 LOC110117498-PIK3R3F6TDL0 507 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 CTDSP2O14595 271 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 MATN3O15232 486 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 TSPAN1O60635 241 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 SCELO95171 688 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 C22orf31O95567 290 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 SERPINA1P01009 418 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 YES1P07947 543 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 NCF1P14598 390 aaPredicted RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 NPR3P17342 541 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 ETV6P41212 452 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 RFX2P48378 723 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 MAP3K7CLP57077 242 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 ZNF33AQ06730 810 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 CYP4F3Q08477 520 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 SLAMF1Q13291 335 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 ARHGEF6Q15052 776 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 TIGD6Q17RP2 521 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 RAP1GAP2Q684P5 730 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 FAAH2Q6GMR7 532 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 ERAP2Q6P179 960 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 CLEC20AQ6ZU45 233 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 CCDC190Q86UF4 302 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 RAB43Q86YS6 212 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 CCDC28AQ8IWP9 274 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 SULF1Q8IWU6 871 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 OR5H6Q8NGV6 325 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 IPCEF1Q8WWN9 437 aaPredicted RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 CENPOQ9BU64 300 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 NUSAP1Q9BXS6 441 aaKnown RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 ZNF717Q9BY31 904 aaPredicted RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 SLC39A8Q9C0K1 460 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 TFB2MQ9H5Q4 396 aaKnown RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 CCDC59Q9P031 241 aaKnown RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 DNMT3LQ9UJW3 386 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 NDRG4Q9ULP0 352 aaKnown RBP10.45□□□□□ -0.74
CCDC171-208ENST00000486641 RNF112Q9ULX5 631 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 AKT3Q9Y243 479 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 SPEF1Q9Y4P9 236 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 LYVE1Q9Y5Y7 322 aa10.45□□□□□ -0.74
CCDC171-208ENST00000486641 ZNF236Q9UL36 1845 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 PNMA8CA0A1B0GUJ8 204 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 SLC12A8A0AV02 714 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 C12orf71A8MTZ7 269 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 SEC22BO75396 215 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 CREG1O75629 220 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 RPLP0P05388 317 aaKnown RBP10.44□□□□□ -0.74
CCDC171-208ENST00000486641 TGFB3P10600 412 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 MSH3P20585 1137 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 HOXA9P31269 272 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 SERPINH1P50454 418 aaKnown RBP10.44□□□□□ -0.74
CCDC171-208ENST00000486641 CREMQ03060 361 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 RBBP7Q16576 425 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 KDM4DQ6B0I6 523 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 PM20D1Q6GTS8 502 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 CYP20A1Q6UW02 462 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 SLC46A3Q7Z3Q1 461 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 PHACTR4Q8IZ21 702 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 B3GALNT2Q8NCR0 500 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 APH1BQ8WW43 257 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 KCTD13Q8WZ19 329 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 PIK3R3Q92569 461 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 EDEM1Q92611 657 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 NCLNQ969V3 563 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 VPS35Q96QK1 796 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 TNKS2Q9H2K2 1166 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 MFSD1Q9H3U5 465 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 RUBCNLQ9H714 662 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 UBA2Q9UBT2 640 aaPredicted RBP10.44□□□□□ -0.74
CCDC171-208ENST00000486641 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.44□□□□□ -0.74
CCDC171-208ENST00000486641 KCNN3Q9UGI6 736 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 ERVW-1Q9UQF0 538 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 EP400Q96L91 3159 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 ANKRD28O15084 1053 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 PCDHGA12O60330 932 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 HBP1O60381 514 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 ECI2O75521 394 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 OR4F21O95013 312 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 RPS17P08708 135 aaKnown RBP10.44□□□□□ -0.74
CCDC171-208ENST00000486641 M6PRP20645 277 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 PKLRP30613 574 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 CXCR3P49682 368 aa10.44□□□□□ -0.74
CCDC171-208ENST00000486641 GMPSP49915 693 aaPredicted RBP10.44□□□□□ -0.74
CCDC171-208ENST00000486641 UGT2B15P54855 530 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms