RNA–Protein interactions for RNA: ENST00000485952.1

SPTLC3-206, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 277 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-206ENST00000485952 XAB2Q9HCS7 855 aaKnown RBP4.44□□□□□ -1.7
SPTLC3-206ENST00000485952 MBNL1Q9NR56 388 aaKnown RBP4.44□□□□□ -1.7
SPTLC3-206ENST00000485952 DDX25Q9UHL0 483 aaKnown RBP4.44□□□□□ -1.7
SPTLC3-206ENST00000485952 KNSTRNQ9Y448 316 aa4.44□□□□□ -1.7
SPTLC3-206ENST00000485952 IGHV4-28A0A0C4DH34 117 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 A0A1W2PPM1 405 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 MYMKA6NI61 221 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 FAM90A26D6RGX4 464 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 NDUFS4O43181 175 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 SPINT2O43291 252 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 HTATSF1O43719 755 aaKnown RBP4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 ZNF217O75362 1048 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 TGDSO95455 350 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 CRYABP02511 175 aaKnown RBP4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 ATP5BP06576 529 aaKnown RBP4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 VPREB1P12018 145 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 FDPSP14324 419 aaKnown RBP4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 GJA1P17302 382 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 ERCC2P18074 760 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 DNASE1P24855 282 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 BDKRB2P30411 391 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 TLX1P31314 330 aaPredicted RBP4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 STX2P32856 288 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 RPL3P39023 403 aaKnown RBP4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 NPY4RP50391 375 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 DSC1Q08554 894 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 KRT33BQ14525 404 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 ZNF273Q14593 569 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 PARP10Q53GL7 1025 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 SUSD4Q5VX71 490 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 TYW3Q6IPR3 259 aaKnown RBP4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 CAVIN1Q6NZI2 390 aaKnown RBP4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 KCTD18Q6PI47 426 aaPredicted RBP4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 SLC36A4Q6YBV0 504 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 ATG9AQ7Z3C6 839 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 TECPR1Q7Z6L1 1165 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 CHERPQ8IWX8 916 aaKnown RBP4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 ZNF34Q8IZ26 560 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 FBXO39Q8N4B4 442 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 CAMKVQ8NCB2 501 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 VOPP1Q96AW1 172 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 CDCA5Q96FF9 252 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 FCRL4Q96PJ5 515 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 GBP5Q96PP8 586 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 NEK1Q96PY6 1258 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 SLC22A12Q96S37 553 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 DCLK3Q9C098 648 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 RAD21L1Q9H4I0 556 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 NOL11Q9H8H0 719 aaKnown RBP4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 CNOT10Q9H9A5 744 aaKnown RBP4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 C17orf75Q9HAS0 396 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 CHMP1AQ9HD42 196 aaPredicted RBP4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 PIH1D3Q9NQM4 214 aaKnown RBP4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 PFDN4Q9NQP4 134 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 RNF7Q9UBF6 113 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 INSL5Q9Y5Q6 135 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 LIPGQ9Y5X9 500 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 ZFP37Q9Y6Q3 630 aaPredicted RBP4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 KIF20BQ96Q89 1820 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 RIC1Q4ADV7 1423 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 TRPM7Q96QT4 1865 aa4.43□□□□□ -1.7
SPTLC3-206ENST00000485952 CEMIPQ8WUJ3 1361 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 IBTKQ9P2D0 1353 aaPredicted RBP4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 COL4A5P29400 1685 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 YDJCA8MPS7 323 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 J3QR06 171 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 PSMD14O00487 310 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 KCNN4O15554 427 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 LINGO3P0C6S8 592 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 PFKFB1P16118 471 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 ACHEP22303 614 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 HOXC13P31276 330 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 KRT2P35908 639 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 MATR3P43243 847 aaKnown RBP eCLIP4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 MXI1P50539 228 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 PGGT1BP53609 377 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 FOXM1Q08050 763 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 GPS2Q13227 327 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 CKAP5Q14008 2032 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 TAF7Q15545 349 aaPredicted RBP4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 MEP1AQ16819 746 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 LEXMQ3ZCV2 418 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 BRAT1Q6PJG6 821 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 FAM198BQ6UWH4 519 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 KIF6Q6ZMV9 814 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 ZNF534Q76KX8 674 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 MAML2Q8IZL2 1156 aaPredicted RBP4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 OR2AK2Q8NG84 335 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 OR14A16Q8NHC5 309 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 TBC1D16Q8TBP0 767 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 WFIKKN2Q8TEU8 576 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 FAM162AQ96A26 154 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 TXNDC15Q96J42 360 aa4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 ZNF48Q96MX3 618 aaPredicted RBP4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 CITED2Q99967 270 aaPredicted RBP4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 GPATCH1Q9BRR8 931 aaKnown RBP4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 UTP14AQ9BVJ6 771 aaKnown RBP4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 PRMT7Q9NVM4 692 aaPredicted RBP4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 CHCHD3Q9NX63 227 aaKnown RBP4.42□□□□□ -1.7
SPTLC3-206ENST00000485952 RASAL2Q9UJF2 1139 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms