RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 ARGFXA6NJG6 315 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 LIN7AO14910 233 aaPredicted RBP16.62■□□□□ 0.25
SMC4-216ENST00000485645 FTCDO95954 541 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 MSNP26038 577 aaKnown RBP16.62■□□□□ 0.25
SMC4-216ENST00000485645 RORAP35398 523 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 LMAN1P49257 510 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 CCL11P51671 97 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 MLLT10P55197 1068 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 CHAF1BQ13112 559 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 ITIH4Q14624 930 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 CPZQ66K79 652 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 LCN10Q6JVE6 187 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 LINC00523Q86TU6 105 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 HOOK3Q86VS8 718 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 ADGRF3Q8IZF5 1079 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 TAB3Q8N5C8 712 aaPredicted RBP16.62■□□□□ 0.25
SMC4-216ENST00000485645 ENDOVQ8N8Q3 282 aaKnown RBP16.62■□□□□ 0.25
SMC4-216ENST00000485645 SLC35B2Q8TB61 432 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 MIB2Q96AX9 1013 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 TRAPPC9Q96Q05 1148 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 SLC25A23Q9BV35 468 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 NLNQ9BYT8 704 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 KLHL25Q9H0H3 589 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 ING2Q9H160 280 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 ACTR10Q9NZ32 417 aa16.62■□□□□ 0.25
SMC4-216ENST00000485645 SPENQ96T58 3664 aaKnown RBP16.61■□□□□ 0.25
SMC4-216ENST00000485645 MED13Q9UHV7 2174 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 CCDC78A2IDD5 438 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 MROH6A6NGR9 719 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 E7EQ34 232 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 FTH1P02794 183 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 PDGFAP04085 211 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 PVRP15151 417 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 PSMA3P25788 255 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 PGDP52209 483 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 ZNF789Q5FWF6 425 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 ATCAYQ86WG3 371 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 DNAAF3Q8N9W5 541 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 ELMO1Q92556 727 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 PCMTD2Q9NV79 361 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 TCFL5Q9UL49 500 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 ASF1AQ9Y294 204 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 PCDHGA9Q9Y5G4 932 aaKnown RBP16.61■□□□□ 0.25
SMC4-216ENST00000485645 PRSS21Q9Y6M0 314 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 MAST4O15021 2626 aa16.61■□□□□ 0.25
SMC4-216ENST00000485645 TCRBV7S2A1N4TA0A589 114 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 OR51F1A6NGY5 319 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 GAS8O95995 478 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 STIP1P31948 543 aaKnown RBP16.6■□□□□ 0.25
SMC4-216ENST00000485645 PTGIRP43119 386 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 CD97P48960 835 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 ITGA1P56199 1179 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 CDH17Q12864 832 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 BRD3Q15059 726 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 CCDC38Q502W7 563 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 SPESP1Q6UW49 350 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 PACS1Q6VY07 963 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 CDHR3Q6ZTQ4 885 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 SYTL1Q8IYJ3 562 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 OR52K1Q8NGK4 314 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 OR5AR1Q8NGP9 310 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 ADAMTS17Q8TE56 1095 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 N4BP2L2Q92802 583 aaPredicted RBP16.6■□□□□ 0.25
SMC4-216ENST00000485645 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMC4-216ENST00000485645 TTC1Q99614 292 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 ANKMY1Q9P2S6 941 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 POLG2Q9UHN1 485 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 ICKQ9UPZ9 632 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 NAV2Q8IVL1 2488 aa16.6■□□□□ 0.25
SMC4-216ENST00000485645 TNRC6AQ8NDV7 1962 aaKnown RBP16.6■□□□□ 0.25
SMC4-216ENST00000485645 TTLL8A6PVC2 850 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 ERI2A8K979 691 aaKnown RBP16.59■□□□□ 0.25
SMC4-216ENST00000485645 ZNF749O43361 778 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 TMEM63AO94886 807 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 CAPN1P07384 714 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 HBQ1P09105 142 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 OR56A5P0C7T3 313 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 ACADLP28330 430 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 FOXN2P32314 431 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 SHMT2P34897 504 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 PLOD1Q02809 727 aaPredicted RBP16.59■□□□□ 0.25
SMC4-216ENST00000485645 SRSF1Q07955 248 aaKnown RBP eCLIP16.59■□□□□ 0.259e-8■■□□□ 13.7
SMC4-216ENST00000485645 PTCHD3Q3KNS1 767 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 SYTL3Q4VX76 610 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 LYPLAL1Q5VWZ2 237 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 FAM198BQ6UWH4 519 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 UNC5AQ6ZN44 842 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 TMEM139Q8IV31 216 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 TBC1D21Q8IYX1 336 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 GPR135Q8IZ08 494 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 HES6Q96HZ4 224 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 DPH2Q9BQC3 489 aaPredicted RBP16.59■□□□□ 0.25
SMC4-216ENST00000485645 DESI2Q9BSY9 194 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 MLXIPLQ9NP71 852 aa16.59■□□□□ 0.25
SMC4-216ENST00000485645 LRRK2Q5S007 2527 aa16.58■□□□□ 0.25
SMC4-216ENST00000485645 A0A0U1RQJ8 604 aa16.58■□□□□ 0.24
SMC4-216ENST00000485645 HEATR9A2RTY3 570 aa16.58■□□□□ 0.24
SMC4-216ENST00000485645 CCDC162PA2VCL2 907 aa16.58■□□□□ 0.24
SMC4-216ENST00000485645 CLEC18AA5D8T8 446 aa16.58■□□□□ 0.24
SMC4-216ENST00000485645 C9J4A7 227 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms