RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 CENPQQ7L2Z9 268 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 MTERF4Q7Z6M4 381 aaKnown RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 LDB1Q86U70 411 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 TSPAN33Q86UF1 283 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 GPR180Q86V85 440 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 SGMS1Q86VZ5 419 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CIR1Q86X95 450 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 ZDHHC21Q8IVQ6 265 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 IZUMO1Q8IYV9 350 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 ABI1Q8IZP0 508 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CENPLQ8N0S6 344 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CARFQ8N187 725 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 LINC00469Q8N7U9 141 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 TTLL6Q8N841 843 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF321PQ8N8H1 164 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 GBP7Q8N8V2 638 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 HJURPQ8NCD3 748 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 RNF169Q8NCN4 708 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 PDZD8Q8NEN9 1154 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 TMEM185AQ8NFB2 350 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 BBS1Q8NFJ9 593 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 LILRB4Q8NHJ6 448 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 SLC35B2Q8TB61 432 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 GOLGA5Q8TBA6 731 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 TMEM171Q8WVE6 324 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 OSCP1Q8WVF1 389 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 DNAJA4Q8WW22 397 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 SELENOMQ8WWX9 145 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 RAD54LQ92698 747 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 ACDQ96AP0 544 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 LENG9Q96B70 501 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 LENG1Q96BZ8 264 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 AP2M1Q96CW1 435 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 RSPRY1Q96DX4 576 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 LINGO1Q96FE5 620 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 PGM2Q96G03 612 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 SCARF2Q96GP6 870 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CDKN2AIPNLQ96HQ2 116 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 C7orf34Q96L11 122 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 IFT74Q96LB3 600 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 NECTIN4Q96NY8 510 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 QRFPRQ96P65 431 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 PSKH2Q96QS6 385 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 DIRC2Q96SL1 478 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 NEU1Q99519 415 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 JPH2Q9BR39 696 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CINPQ9BW66 212 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 GLIS2Q9BZE0 524 aaPredicted RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 B3GNT4Q9C0J1 378 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 TSPYL1Q9H0U9 437 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 NAPBQ9H115 298 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CDT1Q9H211 546 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 TMEM245Q9H330 911 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 UBQLN3Q9H347 655 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 MAGEF1Q9HAY2 307 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 KCNK13Q9HB14 408 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 GLOD4Q9HC38 313 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 VAT1LQ9HCJ6 419 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 LZTFL1Q9NQ48 299 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 KLHL1Q9NR64 748 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 PNPLA3Q9NST1 481 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 ETNK2Q9NVF9 386 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 FAM120CQ9NX05 1096 aaKnown RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 HYPKQ9NX55 129 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 UBAP1Q9NZ09 502 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 RNF181Q9P0P0 153 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 RBPJLQ9UBG7 517 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 DNAJB4Q9UDY4 337 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 MALT1Q9UDY8 824 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 EBF1Q9UH73 591 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 CNOT11Q9UKZ1 510 aaKnown RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 ABT1Q9ULW3 272 aaKnown RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 MGAT4BQ9UQ53 548 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 REXO2Q9Y3B8 237 aaKnown RBP2.84□□□□□ -1.95
HMGN4-202ENST00000477243 AP4B1Q9Y6B7 739 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 PMF1-BGLAPU3KQ54 211 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 NF1P21359 2839 aa2.84□□□□□ -1.95
HMGN4-202ENST00000477243 KIF15Q9NS87 1388 aa2.84□□□□□ -1.96
HMGN4-202ENST00000477243 ARHGAP31Q2M1Z3 1444 aa2.84□□□□□ -1.96
HMGN4-202ENST00000477243 PLEKHH2Q8IVE3 1493 aa2.84□□□□□ -1.96
HMGN4-202ENST00000477243 PRXQ9BXM0 1461 aa2.84□□□□□ -1.96
HMGN4-202ENST00000477243 MBD5Q9P267 1494 aa2.84□□□□□ -1.96
HMGN4-202ENST00000477243 ARHGEF17Q96PE2 2063 aaPredicted RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 THSD7AQ9UPZ6 1657 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 A0A0B4J293 547 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 A0A1W2PR77 199 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 PMS2P1A4D2B8 440 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 GLTPD2A6NH11 291 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 BECN2A8MW95 431 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 TTC34A8MYJ7 566 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 C9orf172C9J069 976 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 KBTBD13C9JR72 458 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 CLDN4O14493 209 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 TRIAP1O43715 76 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 TRIM13O60858 407 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 B4GALT2O60909 372 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ATP9AO75110 1047 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ECI2O75521 394 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 CTAG2O75638 210 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms