RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 NDUFS1P28331 727 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 SLC1A1P43005 524 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 SEPHS1P49903 392 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 NIPAL4Q0D2K0 466 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 PRKAA1Q13131 559 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 GALNT3Q14435 633 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 PLCL1Q15111 1095 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 ASB18Q6ZVZ8 466 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 ADGRG6Q86SQ4 1221 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 AMZ2Q86W34 360 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 RFX6Q8HWS3 928 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 IMP4Q96G21 291 aaKnown RBP7.11□□□□□ -1.27
BRCA1-214ENST00000477152 NAP1L5Q96NT1 182 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-214ENST00000477152 VAT1Q99536 393 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 SIDT1Q9NXL6 827 aaKnown RBP7.11□□□□□ -1.27
BRCA1-214ENST00000477152 DTLQ9NZJ0 730 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 CROTQ9UKG9 612 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 DNAJC16Q9Y2G8 782 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 HEBP2Q9Y5Z4 205 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 COLEC10Q9Y6Z7 277 aa7.11□□□□□ -1.27
BRCA1-214ENST00000477152 PIEZO2Q9H5I5 2752 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 SETXQ7Z333 2677 aaKnown RBP7.1□□□□□ -1.27
BRCA1-214ENST00000477152 UBA6A0AVT1 1052 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-214ENST00000477152 FAM181BA6NEQ2 426 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 KCNK1O00180 336 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 SPAG6O75602 509 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 EML2O95834 649 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 EPOP01588 193 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 SLC4A1P02730 911 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 CD63P08962 238 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 CD48P09326 243 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 TMEM253P0C7T8 217 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 RALBP11234 206 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 TCF4P15884 667 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 NELFEP18615 380 aaKnown RBP7.1□□□□□ -1.27
BRCA1-214ENST00000477152 OAS2P29728 719 aaKnown RBP7.1□□□□□ -1.27
BRCA1-214ENST00000477152 SPAM1P38567 509 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 PMS2P54278 862 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 GSDMDP57764 484 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 TMEM115Q12893 351 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-214ENST00000477152 DNASE1L3Q13609 305 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 DOC2BQ14184 412 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 ERV3-1Q14264 604 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 KRT33BQ14525 404 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 MESDQ14696 234 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 SLC18A3Q16572 532 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 LONRF2Q1L5Z9 754 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 PRSS53Q2L4Q9 553 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 PLA2G4EQ3MJ16 856 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 LRRC38Q5VT99 294 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 TXNRD3NBQ6F5E7 133 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 TIPARPQ7Z3E1 657 aaKnown RBP7.1□□□□□ -1.27
BRCA1-214ENST00000477152 SYVN1Q86TM6 617 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 OOSP2Q86WS3 158 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 APLFQ8IW19 511 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-214ENST00000477152 RHOT1Q8IXI2 618 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 UNC5BQ8IZJ1 945 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 ARHGEF39Q8N4T4 335 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 HEXDCQ8WVB3 486 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 AGAP3Q96P47 875 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 PPP1R2P1Q96PQ5 205 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 SLC29A3Q9BZD2 475 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 APMAPQ9HDC9 416 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 SLC40A1Q9NP59 571 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 ACSS2Q9NR19 701 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 FAM153AQ9UHL3 310 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 ACSL5Q9ULC5 683 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 SHOC2Q9UQ13 582 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 GPR55Q9Y2T6 319 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-214ENST00000477152 EMC9Q9Y3B6 208 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 CELSR3Q9NYQ7 3312 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 CFAP46Q8IYW2 2715 aa7.1□□□□□ -1.27
BRCA1-214ENST00000477152 SSU72P8A0A1W2PR75 194 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 BLACEA4D250 179 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 PRODHO43272 600 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 IGHEP01854 428 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 MSH3P20585 1137 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 HMGCLP35914 325 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 PGDP52209 483 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 HSD11B2P80365 405 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 GBE1Q04446 702 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 ADCY2Q08462 1091 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 XRCC4Q13426 336 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 TUBB3Q13509 450 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 PTPRRQ15256 657 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 SEPT7Q16181 437 aaKnown RBP7.09□□□□□ -1.27
BRCA1-214ENST00000477152 DPY19L1Q2PZI1 675 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 TEX44Q53QW1 395 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 DNTTIP2Q5QJE6 756 aaKnown RBP7.09□□□□□ -1.27
BRCA1-214ENST00000477152 FHL5Q5TD97 284 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 SLC9A4Q6AI14 798 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 GPR26Q8NDV2 337 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 TFB1MQ8WVM0 346 aaKnown RBP7.09□□□□□ -1.27
BRCA1-214ENST00000477152 SGSM3Q96HU1 749 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 WDR24Q96S15 920 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 C17orf62Q9BQA9 187 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 CCM2Q9BSQ5 444 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 SLC7A5P2Q9GIP4 190 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 GLOD4Q9HC38 313 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 LUC7LQ9NQ29 371 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms