RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 TBC1D21Q8IYX1 336 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 SLC22A15Q8IZD6 547 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 ADGRF3Q8IZF5 1079 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 OR5AR1Q8NGP9 310 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 OR5K2Q8NHB8 316 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 ACTRT1Q8TDG2 376 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 COG1Q8WTW3 980 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 EXTL1Q92935 676 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 MAGOHBQ96A72 148 aaKnown RBP13.65□□□□□ -0.22
COMMD3-208ENST00000470045 OSBPL9Q96SU4 736 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 NAP1L3Q99457 506 aaPredicted RBP13.65□□□□□ -0.22
COMMD3-208ENST00000470045 NRTNQ99748 197 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 CARD6Q9BX69 1037 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 AP1M1Q9BXS5 423 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 P2RY12Q9H244 342 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 LATS2Q9NRM7 1088 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 RARRES3Q9UL19 164 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 SOX13Q9UN79 622 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 ICKQ9UPZ9 632 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 ASF1AQ9Y294 204 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 RPS6KL1Q9Y6S9 549 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 BAHCC1Q9P281 2608 aa13.65□□□□□ -0.22
COMMD3-208ENST00000470045 RPS3P23396 243 aaKnown RBP eCLIP13.64□□□□□ -0.23
COMMD3-208ENST00000470045 PRDX3P30048 256 aaKnown RBP13.64□□□□□ -0.23
COMMD3-208ENST00000470045 COILP38432 576 aaPredicted RBP13.64□□□□□ -0.23
COMMD3-208ENST00000470045 VPS41P49754 854 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 TUBB4BP68371 445 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 PRKG2Q13237 762 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 TUBB2AQ13885 445 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 BRD3Q15059 726 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 TBR1Q16650 682 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 TYSND1Q2T9J0 566 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 SYTL3Q4VX76 610 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 ANKRD22Q5VYY1 191 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 KIAA0930Q6ICG6 404 aaPredicted RBP13.64□□□□□ -0.23
COMMD3-208ENST00000470045 PWWP2BQ6NUJ5 590 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 FBXO38Q6PIJ6 1188 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 CCDC137Q6PK04 289 aaKnown RBP13.64□□□□□ -0.23
COMMD3-208ENST00000470045 NAPRTQ6XQN6 538 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 LDB1Q86U70 411 aaPredicted RBP13.64□□□□□ -0.23
COMMD3-208ENST00000470045 CAND1Q86VP6 1230 aaKnown RBP13.64□□□□□ -0.23
COMMD3-208ENST00000470045 UNC5BQ8IZJ1 945 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 EXD3Q8N9H8 876 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 GALNT6Q8NCL4 622 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 OR8K5Q8NH50 307 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 CPT1BQ92523 772 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 ZNF501Q96CX3 271 aaPredicted RBP13.64□□□□□ -0.23
COMMD3-208ENST00000470045 MFSD3Q96ES6 412 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 ELMO2Q96JJ3 720 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 PDLIM2Q96JY6 352 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 TUBB2BQ9BVA1 445 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 TSSK1BQ9BXA7 367 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 IL17BQ9UHF5 180 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 POLG2Q9UHN1 485 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 LNPEPQ9UIQ6 1025 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 ANAPC5Q9UJX4 755 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 SNX12Q9UMY4 172 aa13.64□□□□□ -0.23
COMMD3-208ENST00000470045 ZNF462Q96JM2 2506 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 GCN1Q92616 2671 aaKnown RBP13.63□□□□□ -0.23
COMMD3-208ENST00000470045 GSAPA4D1B5 854 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 SLC9B1P1A6NJY1 282 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 C2orf74A8MZ97 194 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 PHF2O75151 1096 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 SLCO2B1O94956 709 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 MT-ND3P03897 115 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 MLNP12872 115 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 ST6GAL1P15907 406 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 CDH3P22223 829 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 F8A1P23610 371 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 AOAHP28039 575 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 SHMT2P34897 504 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 MAGEA3P43357 314 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 FNTAP49354 379 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 ARL4DP49703 201 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 SARNPP82979 210 aaKnown RBP13.63□□□□□ -0.23
COMMD3-208ENST00000470045 GPR19Q15760 415 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 DNAJC21Q5F1R6 531 aaKnown RBP13.63□□□□□ -0.23
COMMD3-208ENST00000470045 TMTC4Q5T4D3 741 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 LRRC6Q86X45 466 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 VRK3Q8IV63 474 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 MCUQ8NE86 351 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 FLVCR1-AS1Q8TAF5 88 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 ASZ1Q8WWH4 475 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 STARD8Q92502 1023 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 STAMBPL1Q96FJ0 436 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 CATSPER2Q96P56 530 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 XKR8Q9H6D3 395 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 ACTR10Q9NZ32 417 aa13.63□□□□□ -0.23
COMMD3-208ENST00000470045 TLN1Q9Y490 2541 aaKnown RBP13.62□□□□□ -0.23
COMMD3-208ENST00000470045 PIPSLA2A3N6 862 aa13.62□□□□□ -0.23
COMMD3-208ENST00000470045 IQCF5A8MTL0 148 aa13.62□□□□□ -0.23
COMMD3-208ENST00000470045 KIF5CO60282 957 aa13.62□□□□□ -0.23
COMMD3-208ENST00000470045 AVILO75366 819 aa13.62□□□□□ -0.23
COMMD3-208ENST00000470045 VAPBO95292 243 aa13.62□□□□□ -0.23
COMMD3-208ENST00000470045 ITGB6P18564 788 aa13.62□□□□□ -0.23
COMMD3-208ENST00000470045 CDC20Q12834 499 aa13.62□□□□□ -0.23
COMMD3-208ENST00000470045 SPESP1Q6UW49 350 aa13.62□□□□□ -0.23
COMMD3-208ENST00000470045 CES3Q6UWW8 571 aa13.62□□□□□ -0.23
COMMD3-208ENST00000470045 UNC5AQ6ZN44 842 aa13.62□□□□□ -0.23
COMMD3-208ENST00000470045 KRT222Q8N1A0 295 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms