RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 IL1RAPL1Q9NZN1 696 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 BFARQ9NZS9 450 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 POMT2Q9UKY4 750 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 ICKQ9UPZ9 632 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 DRG1Q9Y295 367 aaKnown RBP9.4□□□□□ -0.9
USP54-207ENST00000451492 ZKSCAN5Q9Y2L8 839 aa9.4□□□□□ -0.9
USP54-207ENST00000451492 TNRC6AQ8NDV7 1962 aaKnown RBP9.4□□□□□ -0.9
USP54-207ENST00000451492 CCDC88CQ9P219 2028 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 C2orf74A8MZ97 194 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 PGRMC1O00264 195 aaKnown RBP9.39□□□□□ -0.91
USP54-207ENST00000451492 TMEM63AO94886 807 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 ZIC2O95409 532 aaPredicted RBP9.39□□□□□ -0.91
USP54-207ENST00000451492 ITGB2P05107 769 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 TCN2P20062 427 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 TPSB2P20231 275 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 PRDX3P30048 256 aaKnown RBP9.39□□□□□ -0.91
USP54-207ENST00000451492 CCR7P32248 378 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 CD151P48509 253 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 ACVR1Q04771 509 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 ABRQ12979 859 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 RPA4Q13156 261 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 TPSAB1Q15661 275 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.39□□□□□ -0.91
USP54-207ENST00000451492 AARS2Q5JTZ9 985 aaKnown RBP9.39□□□□□ -0.91
USP54-207ENST00000451492 ANKRD22Q5VYY1 191 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 BORAQ6PGQ7 559 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 CCDC137Q6PK04 289 aaKnown RBP9.39□□□□□ -0.91
USP54-207ENST00000451492 KMT5CQ86Y97 462 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 VRK3Q8IV63 474 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 C2orf73Q8N5S3 287 aaPredicted RBP9.39□□□□□ -0.91
USP54-207ENST00000451492 COG1Q8WTW3 980 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 CT55Q8WUE5 264 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 SKA2Q8WVK7 121 aaPredicted RBP9.39□□□□□ -0.91
USP54-207ENST00000451492 ZFPM2Q8WW38 1151 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 N4BP2L2Q92802 583 aaPredicted RBP9.39□□□□□ -0.91
USP54-207ENST00000451492 MFSD3Q96ES6 412 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 WBP1Q96G27 269 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 SLC45A3Q96JT2 553 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 EFHD1Q9BUP0 239 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 TSSK1BQ9BXA7 367 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 TRIM4Q9C037 500 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 SLC7A5P2Q9GIP4 190 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 IL22Q9GZX6 179 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 KCNF1Q9H3M0 494 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 MVB12BQ9H7P6 319 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 LHX9Q9NQ69 397 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 SAMD15Q9P1V8 674 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 RUVBL2Q9Y230 463 aaKnown RBP9.39□□□□□ -0.91
USP54-207ENST00000451492 JRKLQ9Y4A0 524 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 HEMK1Q9Y5R4 338 aaPredicted RBP9.39□□□□□ -0.91
USP54-207ENST00000451492 GCN1Q92616 2671 aaKnown RBP9.39□□□□□ -0.91
USP54-207ENST00000451492 PIEZO2Q9H5I5 2752 aa9.39□□□□□ -0.91
USP54-207ENST00000451492 SPENQ96T58 3664 aaKnown RBP9.38□□□□□ -0.91
USP54-207ENST00000451492 FER1L5A0AVI2 2057 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 ATRXP46100 2492 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 SLC5A10A0PJK1 596 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 PIPSLA2A3N6 862 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 CDC14CA4D256 554 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 KRT87PA6NCN2 255 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 ISM1B1AKI9 464 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 BHMG1C9JSJ3 638 aaPredicted RBP9.38□□□□□ -0.91
USP54-207ENST00000451492 ZNF185O15231 689 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 SLC28A2O43868 658 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 CPNE3O75131 537 aaKnown RBP9.38□□□□□ -0.91
USP54-207ENST00000451492 NDUFS3O75489 264 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 VAPBO95292 243 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 GSTM1P09488 218 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 FURINP09958 794 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 PLA2G2AP14555 144 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 UGT2B7P16662 529 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 CYP2A7P20853 494 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 PSMA3P25788 255 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 PPARGP37231 505 aaPredicted RBP9.38□□□□□ -0.91
USP54-207ENST00000451492 COILP38432 576 aaPredicted RBP9.38□□□□□ -0.91
USP54-207ENST00000451492 BDKRB1P46663 353 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 NPY2RP49146 381 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 TTPAP49638 278 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 POLE2P56282 527 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 TUBB4BP68371 445 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 GSTM4Q03013 218 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 DNASE1L3Q13609 305 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 TUBB2AQ13885 445 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 MAP7Q14244 749 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 KCNJ11Q14654 390 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 TMED2Q15363 201 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 COLEC12Q5KU26 742 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 LRRC8BQ6P9F7 803 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 SPESP1Q6UW49 350 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 C4orf22Q6V702 233 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 UNC5AQ6ZN44 842 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 TMEM135Q86UB9 458 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 REXO1L1PQ8IX06 675 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 FAM20CQ8IXL6 584 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 TBC1D21Q8IYX1 336 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 ADGRF3Q8IZF5 1079 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 D2HGDHQ8N465 521 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 OR5K2Q8NHB8 316 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 UBE2Q2Q8WVN8 375 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 MR1Q95460 341 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 ZNF669Q96BR6 464 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms