RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 XKR8Q9H6D3 395 aa14.83□□□□□ -0.04
CHD3-205ENST00000449744 HOMER3Q9NSC5 361 aa14.83□□□□□ -0.04
CHD3-205ENST00000449744 BFARQ9NZS9 450 aa14.83□□□□□ -0.04
CHD3-205ENST00000449744 C21orf140B9A014 251 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 KDM1AO60341 852 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 OR1I1O60431 355 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 CPNE3O75131 537 aaKnown RBP14.82□□□□□ -0.04
CHD3-205ENST00000449744 CXCR5P32302 372 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 SHMT2P34897 504 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 KCNJ1P48048 391 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 NPY2RP49146 381 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 ERV3-1Q14264 604 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 ATP1A1-AS1Q5TC04 95 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 NAPRTQ6XQN6 538 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 OR5AR1Q8NGP9 310 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 CT55Q8WUE5 264 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 ZNF501Q96CX3 271 aaPredicted RBP14.82□□□□□ -0.04
CHD3-205ENST00000449744 SYTL2Q9HCH5 934 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 CHRAC1Q9NRG0 131 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 CATSPERZQ9NTU4 200 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 ACTR10Q9NZ32 417 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 POLG2Q9UHN1 485 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 TUBD1Q9UJT1 453 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 PPP2R2CQ9Y2T4 447 aa14.82□□□□□ -0.04
CHD3-205ENST00000449744 TDRKHQ9Y2W6 561 aaKnown RBP14.82□□□□□ -0.04
CHD3-205ENST00000449744 PIKFYVEQ9Y2I7 2098 aa14.81□□□□□ -0.04
CHD3-205ENST00000449744 SLC5A10A0PJK1 596 aa14.81□□□□□ -0.04
CHD3-205ENST00000449744 PIPSLA2A3N6 862 aa14.81□□□□□ -0.04
CHD3-205ENST00000449744 CDC14CA4D256 554 aa14.81□□□□□ -0.04
CHD3-205ENST00000449744 KLK3P07288 261 aaPredicted RBP14.81□□□□□ -0.04
CHD3-205ENST00000449744 ACADLP28330 430 aa14.81□□□□□ -0.04
CHD3-205ENST00000449744 CSE1LP55060 971 aaKnown RBP14.81□□□□□ -0.04
CHD3-205ENST00000449744 RPS15P62841 145 aaKnown RBP14.81□□□□□ -0.04
CHD3-205ENST00000449744 NFKB2Q00653 900 aa14.81□□□□□ -0.04
CHD3-205ENST00000449744 ZNF534Q76KX8 674 aa14.81□□□□□ -0.04
CHD3-205ENST00000449744 MR1Q95460 341 aa14.81□□□□□ -0.04
CHD3-205ENST00000449744 SGSM3Q96HU1 749 aa14.81□□□□□ -0.04
CHD3-205ENST00000449744 SLC7A5P2Q9GIP4 190 aa14.81□□□□□ -0.04
CHD3-205ENST00000449744 IL22Q9GZX6 179 aa14.81□□□□□ -0.04
CHD3-205ENST00000449744 TWSG1Q9GZX9 223 aa14.81□□□□□ -0.04
CHD3-205ENST00000449744 LATS2Q9NRM7 1088 aa14.81□□□□□ -0.04
CHD3-205ENST00000449744 ICKQ9UPZ9 632 aa14.81□□□□□ -0.04
CHD3-205ENST00000449744 POLHQ9Y253 713 aa14.81□□□□□ -0.04
CHD3-205ENST00000449744 PCDHGA6Q9Y5G7 932 aa14.81□□□□□ -0.04
CHD3-205ENST00000449744 SETXQ7Z333 2677 aaKnown RBP14.8□□□□□ -0.04
CHD3-205ENST00000449744 TMEM150CB9EJG8 249 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 BHMG1C9JSJ3 638 aaPredicted RBP14.8□□□□□ -0.04
CHD3-205ENST00000449744 TERTO14746 1132 aaKnown RBP14.8□□□□□ -0.04
CHD3-205ENST00000449744 CD3EAPO15446 510 aaKnown RBP14.8□□□□□ -0.04
CHD3-205ENST00000449744 CREG1O75629 220 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 ST6GAL1P15907 406 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 TTPAP49638 278 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 HSPA14Q0VDF9 509 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 SEMA3AQ14563 771 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 TMED2Q15363 201 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 PTRHD1Q6GMV3 140 aaKnown RBP14.8□□□□□ -0.04
CHD3-205ENST00000449744 FAM199XQ6PEV8 388 aaPredicted RBP14.8□□□□□ -0.04
CHD3-205ENST00000449744 UNC5AQ6ZN44 842 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 ATG14Q6ZNE5 492 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 LDB1Q86U70 411 aaPredicted RBP14.8□□□□□ -0.04
CHD3-205ENST00000449744 ADGRF3Q8IZF5 1079 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 OTUD6BQ8N6M0 293 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 OR5K2Q8NHB8 316 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 C9orf43Q8TAL5 461 aaPredicted RBP14.8□□□□□ -0.04
CHD3-205ENST00000449744 SEC14L1Q92503 715 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 CPT1BQ92523 772 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 N4BP2L2Q92802 583 aaPredicted RBP14.8□□□□□ -0.04
CHD3-205ENST00000449744 CLIP3Q96DZ5 547 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 TRAPPC9Q96Q05 1148 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 NRTNQ99748 197 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 CARD6Q9BX69 1037 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 GPR87Q9BY21 358 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 PITPNM3Q9BZ71 974 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 KLHL25Q9H0H3 589 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 SERTAD3Q9UJW9 196 aa14.8□□□□□ -0.04
CHD3-205ENST00000449744 PIEZO2Q9H5I5 2752 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 PRMT5O14744 637 aaPredicted RBP14.79□□□□□ -0.04
CHD3-205ENST00000449744 NDUFS3O75489 264 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 RECKO95980 971 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 APOA4P06727 396 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 PVRP15151 417 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 CYP2A7P20853 494 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 MGAT1P26572 445 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 CCR7P32248 378 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 TERF1P54274 439 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 CRADDP78560 199 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 SARNPP82979 210 aaKnown RBP14.79□□□□□ -0.04
CHD3-205ENST00000449744 CDK16Q00536 496 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 TRIP13Q15645 432 aaPredicted RBP14.79□□□□□ -0.04
CHD3-205ENST00000449744 DNAJC21Q5F1R6 531 aaKnown RBP14.79□□□□□ -0.04
CHD3-205ENST00000449744 SPESP1Q6UW49 350 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 PRELID2Q8N945 189 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 GSDMBQ8TAX9 411 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 ASZ1Q8WWH4 475 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 PANX3Q96QZ0 392 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 AP1M1Q9BXS5 423 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 ACTL8Q9H568 366 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 AKIRIN1Q9H9L7 192 aaPredicted RBP14.79□□□□□ -0.04
CHD3-205ENST00000449744 TREX1Q9NSU2 369 aa14.79□□□□□ -0.04
CHD3-205ENST00000449744 OR6C2Q9NZP2 312 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms