RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 ACADLP28330 430 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 PRDX3P30048 256 aaKnown RBP12.69□□□□□ -0.38
SEC22C-209ENST00000449617 CSE1LP55060 971 aaKnown RBP12.69□□□□□ -0.38
SEC22C-209ENST00000449617 NFKB2Q00653 900 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 KCNAB2Q13303 367 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 DNASE1L3Q13609 305 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 CRTC2Q53ET0 693 aaPredicted RBP12.69□□□□□ -0.38
SEC22C-209ENST00000449617 PCID2Q5JVF3 399 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 PRICKLE2Q7Z3G6 844 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 LDB1Q86U70 411 aaPredicted RBP12.69□□□□□ -0.38
SEC22C-209ENST00000449617 TMEM126BQ8IUX1 230 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 ADGRF3Q8IZF5 1079 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 PRELID2Q8N945 189 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 OR8K5Q8NH50 307 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 LKAAEAR1Q8TD35 194 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 PEX13Q92968 403 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 ZNF501Q96CX3 271 aaPredicted RBP12.69□□□□□ -0.38
SEC22C-209ENST00000449617 SGSM3Q96HU1 749 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 PITPNM3Q9BZ71 974 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 FAM117AQ9C073 453 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 IL22Q9GZX6 179 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 SLC25A18Q9H1K4 315 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 CATSPERZQ9NTU4 200 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 ACTR10Q9NZ32 417 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 MARCH4Q9P2E8 410 aaPredicted RBP12.69□□□□□ -0.38
SEC22C-209ENST00000449617 KCND3Q9UK17 655 aa12.69□□□□□ -0.38
SEC22C-209ENST00000449617 HEMK1Q9Y5R4 338 aaPredicted RBP12.69□□□□□ -0.38
SEC22C-209ENST00000449617 C2orf74A8MZ97 194 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 F8W8V4 182 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 J3QKU1 62 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 CPNE3O75131 537 aaKnown RBP12.68□□□□□ -0.38
SEC22C-209ENST00000449617 SCRG1O75711 98 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 PVRP15151 417 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 PLOD1Q02809 727 aaPredicted RBP12.68□□□□□ -0.38
SEC22C-209ENST00000449617 ABRQ12979 859 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 TRIP13Q15645 432 aaPredicted RBP12.68□□□□□ -0.38
SEC22C-209ENST00000449617 AARS2Q5JTZ9 985 aaKnown RBP12.68□□□□□ -0.38
SEC22C-209ENST00000449617 SPESP1Q6UW49 350 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 TRIM73Q86UV7 250 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 TBC1D21Q8IYX1 336 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 OR5K2Q8NHB8 316 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 RUFY1Q96T51 708 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 KLHL25Q9H0H3 589 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 AKIRIN1Q9H9L7 192 aaPredicted RBP12.68□□□□□ -0.38
SEC22C-209ENST00000449617 FANCEQ9HB96 536 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 LATS2Q9NRM7 1088 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 KCND1Q9NSA2 647 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 HOMER3Q9NSC5 361 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 TREX1Q9NSU2 369 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 BFARQ9NZS9 450 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 TTC7AQ9ULT0 858 aaPredicted RBP12.68□□□□□ -0.38
SEC22C-209ENST00000449617 TDRKHQ9Y2W6 561 aaKnown RBP12.68□□□□□ -0.38
SEC22C-209ENST00000449617 PCDHB3Q9Y5E6 796 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 PCDHGA6Q9Y5G7 932 aa12.68□□□□□ -0.38
SEC22C-209ENST00000449617 TCRBV7S3A2A0A539 114 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 PIPSLA2A3N6 862 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 IQCF5A8MTL0 148 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 C21orf140B9A014 251 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 TMEM150CB9EJG8 249 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 PYCARD-AS1I3L0S3 204 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 CD3EAPO15446 510 aaKnown RBP12.67□□□□□ -0.38
SEC22C-209ENST00000449617 FURINP09958 794 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 TPBGLP0DKB5 382 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 MGAT1P26572 445 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 NMBRP28336 390 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 CCR7P32248 378 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 SHMT2P34897 504 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 PPARGP37231 505 aaPredicted RBP12.67□□□□□ -0.38
SEC22C-209ENST00000449617 VPS41P49754 854 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 TERF1P54274 439 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 GPS2Q13227 327 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 ERV3-1Q14264 604 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 PRAMEF17Q5VTA0 474 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 FAM199XQ6PEV8 388 aaPredicted RBP12.67□□□□□ -0.38
SEC22C-209ENST00000449617 UNC5AQ6ZN44 842 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 VRK3Q8IV63 474 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 SLC38A9Q8NBW4 561 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 APOBEC4Q8WW27 367 aaKnown RBP12.67□□□□□ -0.38
SEC22C-209ENST00000449617 TRAPPC9Q96Q05 1148 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 TSSK1BQ9BXA7 367 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 ACTL8Q9H568 366 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 SYBUQ9NX95 663 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 POLG2Q9UHN1 485 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 TUBD1Q9UJT1 453 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 ANAPC5Q9UJX4 755 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 PLAGL1Q9UM63 463 aa12.67□□□□□ -0.38
SEC22C-209ENST00000449617 CDC14CA4D256 554 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 AP3B1O00203 1094 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 PRMT5O14744 637 aaPredicted RBP12.66□□□□□ -0.38
SEC22C-209ENST00000449617 CREG1O75629 220 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 UGT2B7P16662 529 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 TPSB2P20231 275 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 NPY2RP49146 381 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 TTPAP49638 278 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 CDK16Q00536 496 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 HSPA14Q0VDF9 509 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 TPSAB1Q15661 275 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 DNAJC21Q5F1R6 531 aaKnown RBP12.66□□□□□ -0.38
SEC22C-209ENST00000449617 ZNF789Q5FWF6 425 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 CES3Q6UWW8 571 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms