RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 HERC2P3Q9BVR0 1158 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 LRRC4CQ9HCJ2 640 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 PDE7BQ9NP56 450 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 FARSBQ9NSD9 589 aaKnown RBP8.41□□□□□ -1.06
PTPN3-204ENST00000446349 N6AMT1Q9Y5N5 214 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 KCPQ6ZWJ8 1503 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 HAT1O14929 419 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 PRAMEF12O95522 483 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 DLDP09622 509 aaKnown RBP8.41□□□□□ -1.06
PTPN3-204ENST00000446349 TYRP14679 529 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 C2orf27AQ580R0 203 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 PLEKHS1Q5SXH7 462 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 ZCCHC23Q6ZST2 131 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 TRABD2AQ86V40 505 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 CCDC54Q8NEL0 328 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 TSPAN14Q8NG11 270 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 IGSF21Q96ID5 467 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 TBATAQ96M53 351 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 VRTNQ9H8Y1 702 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 GKN1Q9NS71 199 aa8.41□□□□□ -1.06
PTPN3-204ENST00000446349 IL7RP16871 459 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 GRIA2P42262 883 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 RPL19P84098 196 aaKnown RBP8.4□□□□□ -1.06
PTPN3-204ENST00000446349 DCP2Q8IU60 420 aaKnown RBP8.4□□□□□ -1.06
PTPN3-204ENST00000446349 OR4C15Q8NGM1 316 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 RMI1Q9H9A7 625 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 FCF1Q9Y324 198 aaKnown RBP8.4□□□□□ -1.06
PTPN3-204ENST00000446349 C4BP0C0L5 1744 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 ATP1B2P14415 290 aaPredicted RBP8.4□□□□□ -1.06
PTPN3-204ENST00000446349 TRIM32Q13049 653 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 MRPL49Q13405 166 aaKnown RBP8.4□□□□□ -1.06
PTPN3-204ENST00000446349 SGCBQ16585 318 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 PIK3R6Q5UE93 754 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 LRP10Q7Z4F1 713 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 XAGE5Q8WWM1 108 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 FKBP10Q96AY3 582 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 HHIPL1Q96JK4 782 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 C6orf62Q9GZU0 229 aaPredicted RBP8.4□□□□□ -1.06
PTPN3-204ENST00000446349 NSUN3Q9H649 340 aaKnown RBP8.4□□□□□ -1.06
PTPN3-204ENST00000446349 NOL11Q9H8H0 719 aaKnown RBP8.4□□□□□ -1.06
PTPN3-204ENST00000446349 PNPLA3Q9NST1 481 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 TMEM248Q9NWD8 314 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 TELO2Q9Y4R8 837 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 NBNO60934 754 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 KHDRBS3O75525 346 aaKnown RBP8.4□□□□□ -1.06
PTPN3-204ENST00000446349 ALPPP05187 535 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 IL12RB1P42701 662 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 SOWAHAQ2M3V2 549 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 ADGRD1Q6QNK2 874 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 ARHGAP36Q6ZRI8 547 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 TRPV1Q8NER1 839 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 CAPSLQ8WWF8 208 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 APOLD1Q96LR9 279 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 TMEM184CQ9NVA4 438 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 CNTN6Q9UQ52 1028 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 PDCD5O14737 125 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 DRD1P21728 446 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 GNALP38405 381 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 CHCHD6Q9BRQ6 235 aa8.4□□□□□ -1.06
PTPN3-204ENST00000446349 POLR3BQ9NW08 1133 aaPredicted RBP8.4□□□□□ -1.06
PTPN3-204ENST00000446349 SNX3O60493 162 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 FABP3P05413 133 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 INCA1Q0VD86 236 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 LRIF1Q5T3J3 769 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 COX4I2Q96KJ9 171 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 KCNH6Q9H252 994 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 POPDC3Q9HBV1 291 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 ZDHHC7Q9NXF8 308 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 P2RX2Q9UBL9 471 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 UPB1Q9UBR1 384 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 PTGES3LE9PB15 166 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 TP53I11O14683 189 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 UNC5CO95185 931 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 IFNA6P05013 189 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 UGT1A1P22309 533 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 CCL14Q16627 93 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 KLHL22Q53GT1 634 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 KIAA1161Q6NSJ0 714 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 CYP2R1Q6VVX0 501 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 PLA2G15Q8NCC3 412 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 TMEM109Q9BVC6 243 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 CRISPLD1Q9H336 500 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 MVB12BQ9H7P6 319 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 PRODH2Q9UF12 536 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 CLEC3AO75596 197 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 IFI35P80217 286 aaPredicted RBP8.4□□□□□ -1.07
PTPN3-204ENST00000446349 ZBTB6Q15916 424 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 ARHGAP40Q5TG30 622 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 SAPCD2Q86UD0 394 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 FBXW8Q8N3Y1 598 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 ZNF540Q8NDQ6 660 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 ZNF296Q8WUU4 475 aaPredicted RBP8.4□□□□□ -1.07
PTPN3-204ENST00000446349 RNF31Q96EP0 1072 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 GTPBP2Q9BX10 602 aaKnown RBP8.4□□□□□ -1.07
PTPN3-204ENST00000446349 CAB39LQ9H9S4 337 aa8.4□□□□□ -1.07
PTPN3-204ENST00000446349 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.39□□□□□ -1.07
PTPN3-204ENST00000446349 MAGEB17A8MXT2 336 aa8.39□□□□□ -1.07
PTPN3-204ENST00000446349 C2orf74A8MZ97 194 aa8.39□□□□□ -1.07
PTPN3-204ENST00000446349 PSMD11O00231 422 aa8.39□□□□□ -1.07
PTPN3-204ENST00000446349 PRODHO43272 600 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms