RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 TXNDC11Q6PKC3 985 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 ADAMTSL2Q86TH1 951 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 PELI3Q8N2H9 469 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 OR9I1Q8NGQ6 314 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 ZNF641Q96N77 438 aaPredicted RBP13.89□□□□□ -0.19
LIMD1-202ENST00000440097 CDK15Q96Q40 435 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 COPS8Q99627 209 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 SLX1AQ9BQ83 275 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 NPLQ9BXD5 320 aaPredicted RBP13.89□□□□□ -0.19
LIMD1-202ENST00000440097 DPP7Q9UHL4 492 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 ERVW-1Q9UQF0 538 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 PRORSD1PA6NEY8 169 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 CCDC85CA6NKD9 419 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 SLC9A3R1O14745 358 aaPredicted RBP13.89□□□□□ -0.19
LIMD1-202ENST00000440097 LEFTY1O75610 366 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 ZNF12P17014 697 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 DGKAP23743 735 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 RAB15P59190 212 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 PMS2P3Q13401 168 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 GPM6BQ13491 265 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 ARSIQ5FYB1 569 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 FGD3Q5JSP0 725 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 PRSS36Q5K4E3 855 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 LYPLAL1Q5VWZ2 237 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 PPP4R4Q6NUP7 873 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 C16orf87Q6PH81 154 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 ZBTB46Q86UZ6 589 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 HMGCLL1Q8TB92 370 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 UHRF1Q96T88 793 aaPredicted RBP13.89□□□□□ -0.19
LIMD1-202ENST00000440097 HTATIP2Q9BUP3 242 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 CPEB1Q9BZB8 566 aaKnown RBP13.89□□□□□ -0.19
LIMD1-202ENST00000440097 SMOXQ9NWM0 555 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 ASB1Q9Y576 335 aa13.89□□□□□ -0.19
LIMD1-202ENST00000440097 STX16O14662 325 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 AKAP10O43572 662 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 MLYCDO95822 493 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 HOXD12P35452 270 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 C18orf21Q32NC0 220 aaPredicted RBP13.88□□□□□ -0.19
LIMD1-202ENST00000440097 UGT3A2Q3SY77 523 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 TCEAL5Q5H9L2 206 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 LAYNQ6UX15 382 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 TMEM26Q6ZUK4 368 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 LARP4Q71RC2 724 aaKnown RBP eCLIP13.88□□□□□ -0.19
LIMD1-202ENST00000440097 RTL10Q7L3V2 364 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 ZBTB2Q8N680 514 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 CDYL2Q8N8U2 506 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 OR56A4Q8NGH8 313 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 ECHDC3Q96DC8 303 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 ZFYVE19Q96K21 471 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 NEURL2Q9BR09 285 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 FAM8A1Q9UBU6 413 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 PCTPQ9UKL6 214 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 GBF1Q92538 1859 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 TMEM247A6NEH6 219 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 RAD51BO15315 384 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 FGF4P08620 206 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 RPS17P08708 135 aaKnown RBP13.88□□□□□ -0.19
LIMD1-202ENST00000440097 INHBBP09529 407 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 HGFP14210 728 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 CD9P21926 228 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 NSG1P42857 185 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 PSMD8P48556 350 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 DGKGP49619 791 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 BNIP3Q12983 259 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 STX5Q13190 355 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 DHCR24Q15392 516 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 MAPRE2Q15555 327 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 ADGRD2Q7Z7M1 963 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 ANKFN1Q8N957 763 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 STON2Q8WXE9 905 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 LYSMD1Q96S90 227 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 HEPHQ9BQS7 1158 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 GPATCH1Q9BRR8 931 aaKnown RBP13.88□□□□□ -0.19
LIMD1-202ENST00000440097 FAM126AQ9BYI3 521 aaPredicted RBP13.88□□□□□ -0.19
LIMD1-202ENST00000440097 NAA50Q9GZZ1 169 aaKnown RBP13.88□□□□□ -0.19
LIMD1-202ENST00000440097 NSUN3Q9H649 340 aaKnown RBP13.88□□□□□ -0.19
LIMD1-202ENST00000440097 MRGBPQ9NV56 204 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 CACNA2D2Q9NY47 1150 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 HELZP42694 1942 aaKnown RBP13.88□□□□□ -0.19
LIMD1-202ENST00000440097 NOTCH4Q99466 2003 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 FFAR2O15552 330 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 MTX2O75431 263 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 KATNA1O75449 491 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 LRP8Q14114 963 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 DMC1Q14565 340 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 TTLL9Q3SXZ7 439 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 C6orf10Q5SRN2 563 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 KANK2Q63ZY3 851 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 REP15Q6BDI9 236 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 GPRIN3Q6ZVF9 776 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 CBARPQ8N350 705 aaPredicted RBP13.88□□□□□ -0.19
LIMD1-202ENST00000440097 CELF5Q8N6W0 485 aaKnown RBP13.88□□□□□ -0.19
LIMD1-202ENST00000440097 ADAMTS16Q8TE57 1224 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 OTUB2Q96DC9 234 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 ACOX2Q99424 681 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 EFHD1Q9BUP0 239 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 MRPL40Q9NQ50 206 aaKnown RBP13.88□□□□□ -0.19
LIMD1-202ENST00000440097 TRNAU1APQ9NX07 287 aaKnown RBP13.88□□□□□ -0.19
LIMD1-202ENST00000440097 ANGPTL3Q9Y5C1 460 aa13.88□□□□□ -0.19
LIMD1-202ENST00000440097 C9JVG2 144 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms