RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 TRAM1L1Q8N609 369 aa7.35□□□□□ -1.23
CXCR4-202ENST00000409817 CLDN19Q8N6F1 224 aa7.35□□□□□ -1.23
CXCR4-202ENST00000409817 CHST14Q8NCH0 376 aa7.35□□□□□ -1.23
CXCR4-202ENST00000409817 BPIFB1Q8TDL5 484 aa7.35□□□□□ -1.23
CXCR4-202ENST00000409817 SLC26A7Q8TE54 656 aa7.35□□□□□ -1.23
CXCR4-202ENST00000409817 NANOS1Q8WY41 292 aaKnown RBP7.35□□□□□ -1.23
CXCR4-202ENST00000409817 CCDC124Q96CT7 223 aaKnown RBP7.35□□□□□ -1.23
CXCR4-202ENST00000409817 DCUN1D1Q96GG9 259 aa7.35□□□□□ -1.23
CXCR4-202ENST00000409817 NAF1Q96HR8 494 aaKnown RBP7.35□□□□□ -1.23
CXCR4-202ENST00000409817 MARK4Q96L34 752 aa7.35□□□□□ -1.23
CXCR4-202ENST00000409817 MAGEB10Q96LZ2 347 aaPredicted RBP7.35□□□□□ -1.23
CXCR4-202ENST00000409817 C3orf30Q96M34 536 aa7.35□□□□□ -1.23
CXCR4-202ENST00000409817 CDCA3Q99618 268 aaPredicted RBP7.35□□□□□ -1.23
CXCR4-202ENST00000409817 HOPXQ9BPY8 73 aaPredicted RBP7.35□□□□□ -1.23
CXCR4-202ENST00000409817 TRIM54Q9BYV2 358 aa7.35□□□□□ -1.23
CXCR4-202ENST00000409817 BRINP2Q9C0B6 783 aa7.35□□□□□ -1.23
CXCR4-202ENST00000409817 TUBB1Q9H4B7 451 aa7.35□□□□□ -1.23
CXCR4-202ENST00000409817 FAM83DQ9H4H8 585 aa7.35□□□□□ -1.23
CXCR4-202ENST00000409817 SPAG4Q9NPE6 437 aa7.35□□□□□ -1.23
CXCR4-202ENST00000409817 ZIM2Q9NZV7 527 aa7.35□□□□□ -1.23
CXCR4-202ENST00000409817 CCDC167Q9P0B6 97 aa7.35□□□□□ -1.23
CXCR4-202ENST00000409817 SUCOQ9UBS9 1254 aaKnown RBP7.35□□□□□ -1.23
CXCR4-202ENST00000409817 EIF2B4Q9UI10 523 aaKnown RBP7.35□□□□□ -1.23
CXCR4-202ENST00000409817 ST14Q9Y5Y6 855 aa7.35□□□□□ -1.23
CXCR4-202ENST00000409817 PRSS21Q9Y6M0 314 aa7.35□□□□□ -1.23
CXCR4-202ENST00000409817 ATP6AP2A0A1C7CYW4 349 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 PABPN1LA6NDY0 278 aaKnown RBP7.34□□□□□ -1.23
CXCR4-202ENST00000409817 H0Y858 1186 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 K7EPI3 171 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 IFRD1O00458 451 aaPredicted RBP7.34□□□□□ -1.23
CXCR4-202ENST00000409817 PPP6CO00743 305 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 MRASO14807 208 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 LEFTY1O75610 366 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 ATP6AP2O75787 350 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 BCAS2O75934 225 aaPredicted RBP7.34□□□□□ -1.23
CXCR4-202ENST00000409817 NPPAP01160 153 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 FTH1P02794 183 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 PRNPP04156 253 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 ANXA5P08758 320 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 ATP1B2P14415 290 aaPredicted RBP7.34□□□□□ -1.23
CXCR4-202ENST00000409817 SYN1P17600 705 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 AOAHP28039 575 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 AP1S2P56377 157 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 PSME3P61289 254 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 TRAP1Q12931 704 aaKnown RBP7.34□□□□□ -1.23
CXCR4-202ENST00000409817 MAD2L1Q13257 205 aaPredicted RBP7.34□□□□□ -1.23
CXCR4-202ENST00000409817 CCNIQ14094 377 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 FLOT2Q14254 428 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 PDGFRLQ15198 375 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 DUSP6Q16828 381 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 ZNF284Q2VY69 593 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 ATP6AP1LQ52LC2 224 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 PDCD4Q53EL6 469 aaKnown RBP7.34□□□□□ -1.23
CXCR4-202ENST00000409817 SAMD4BQ5PRF9 694 aaKnown RBP7.34□□□□□ -1.23
CXCR4-202ENST00000409817 TCHHL1Q5QJ38 904 aaPredicted RBP7.34□□□□□ -1.23
CXCR4-202ENST00000409817 LDLRAP1Q5SW96 308 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 TLDC1Q6P9B6 456 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 GOLGA7Q7Z5G4 137 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 DHDDSQ86SQ9 333 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 GALNT13Q8IUC8 556 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 DDHD1Q8NEL9 900 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 HMGCLL1Q8TB92 370 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 SMARCD2Q92925 531 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 RHBDF1Q96CC6 855 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 ASB9Q96DX5 294 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 SPACA7Q96KW9 195 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 VPS35Q96QK1 796 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 EGFL8Q99944 293 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 FAM83CQ9BQN1 747 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 NTMT1Q9BV86 223 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 SPATA16Q9BXB7 569 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 CD244Q9BZW8 370 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 IGFLR1Q9H665 355 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 NOL11Q9H8H0 719 aaKnown RBP7.34□□□□□ -1.23
CXCR4-202ENST00000409817 TRPV4Q9HBA0 871 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 BATF3Q9NR55 127 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 AIG1Q9NVV5 245 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 GID8Q9NWU2 228 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 NMRK1Q9NWW6 199 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 ELOVL2Q9NXB9 296 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 GDE1Q9NZC3 331 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 WWOXQ9NZC7 414 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 C6orf203Q9P0P8 240 aaPredicted RBP7.34□□□□□ -1.23
CXCR4-202ENST00000409817 OPTCQ9UBM4 332 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 TRPS1Q9UHF7 1281 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 ZNF225Q9UK10 706 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 CROTQ9UKG9 612 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 ANGPTL3Q9Y5C1 460 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 PCDHGA7Q9Y5G6 932 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 GPR45Q9Y5Y3 372 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 TTC34A8MYJ7 566 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 ANGPT2O15123 496 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 TULP3O75386 442 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 OR4F21O95013 312 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 CSPG5O95196 566 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 STAMBPO95630 424 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 CA3P07451 260 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 HIST1H2AGP0C0S8 130 aaPredicted RBP7.34□□□□□ -1.23
CXCR4-202ENST00000409817 LINC00032P0C843 101 aa7.34□□□□□ -1.23
CXCR4-202ENST00000409817 EBLN1P0CF75 366 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms