RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 TPK1Q9H3S4 243 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 SORCS3Q9UPU3 1222 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 ABCC6O95255 1503 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 TNFRSF10BO14763 440 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 C9P02748 559 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 LIMK2P53671 638 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 GPR68Q15743 365 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 MAPK14Q16539 360 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 LPAL2Q16609 132 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 IRF7Q92985 503 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 ZHX1-C8orf76Q96EF9 292 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 ZSCAN5AQ9BUG6 496 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 CNTN3Q9P232 1028 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 NEMP2A6NFY4 417 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 PCDHGA12O60330 932 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 KERAO60938 352 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 SNUPNO95149 360 aaKnown RBP11.16□□□□□ -0.62
TTC28-201ENST00000397906 ACVRL1P37023 503 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 SLC6A9P48067 706 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 WDR45BQ5MNZ6 344 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 HFE2Q6ZVN8 426 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 PLA2G15Q8NCC3 412 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 CHST4Q8NCG5 386 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 TBC1D10AQ9BXI6 508 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 IFNW1P05000 195 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 CHAF1BQ13112 559 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 SLBPQ14493 270 aaKnown RBP eCLIP11.16□□□□□ -0.62
TTC28-201ENST00000397906 AAK1Q2M2I8 961 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 KCTD21Q4G0X4 260 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 PAOXQ6QHF9 649 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 HAPLN3Q96S86 360 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 TNFRSF11BO00300 401 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 TRIM3O75382 744 aaPredicted RBP11.16□□□□□ -0.62
TTC28-201ENST00000397906 IL33O95760 270 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 RB1P06400 928 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 MYBPC3Q14896 1274 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 ACDQ96AP0 544 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 EFHD2Q96C19 240 aaPredicted RBP11.16□□□□□ -0.62
TTC28-201ENST00000397906 DTLQ9NZJ0 730 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 DGKBQ9Y6T7 804 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 FAM237AA0A1B0GTK4 181 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 CCDC162PA2VCL2 907 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 CDC123O75794 336 aaPredicted RBP11.16□□□□□ -0.62
TTC28-201ENST00000397906 ZNF823P16415 610 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 CREB5Q02930 508 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 SLC10A7Q0GE19 358 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 ZCCHC12Q6PEW1 402 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 CXorf56Q9H5V9 222 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 ERI3O43414 337 aaKnown RBP11.16□□□□□ -0.62
TTC28-201ENST00000397906 MZT2BQ6NZ67 158 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 PJA1Q8NG27 643 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 OVCA2Q8WZ82 227 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 LEFTY2O00292 366 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 TULP2O00295 520 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 MPIP34949 423 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 GRK6P43250 576 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 PER3P56645 1201 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 RIPK1Q13546 671 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 NAIF1Q69YI7 327 aaPredicted RBP11.15□□□□□ -0.62
TTC28-201ENST00000397906 LIN54Q6MZP7 749 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 TRABD2AQ86V40 505 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 CLIP4Q8N3C7 705 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 PSMA8Q8TAA3 256 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 RBCK1Q9BYM8 510 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 HMG20AQ9NP66 347 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 UBE2QL1A1L167 161 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 TAB1Q15750 504 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 ARL13AQ5H913 290 aaPredicted RBP11.15□□□□□ -0.62
TTC28-201ENST00000397906 ZNF781Q8N8C0 355 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 PCDH19Q8TAB3 1148 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 JPH3Q8WXH2 748 aaPredicted RBP11.15□□□□□ -0.62
TTC28-201ENST00000397906 ZNF516Q92618 1163 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 LRCH1Q9Y2L9 728 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 WASF2Q9Y6W5 498 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 PI15O43692 258 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 TNFRSF8P28908 595 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 CDKN1CP49918 316 aaPredicted RBP11.15□□□□□ -0.62
TTC28-201ENST00000397906 GSTCDQ8NEC7 633 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 OR4C6Q8NH72 309 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 GSDMCQ9BYG8 508 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 TMLHEQ9NVH6 421 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 MARK1Q9P0L2 795 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 RNF225M0QZC1 329 aaPredicted RBP11.15□□□□□ -0.62
TTC28-201ENST00000397906 SNX3O60493 162 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 ESR1P03372 595 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 MNDAP41218 407 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 VLDLRP98155 873 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 NFKB2Q00653 900 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 LRRC66Q68CR7 880 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 MPP5Q8N3R9 675 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 KBTBD7Q8WVZ9 684 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 HS3ST4Q9Y661 456 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 CCDC182A6NF36 153 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 UNC5CO95185 931 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 VIPR1P32241 457 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 KHKP50053 298 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 CHN2P52757 468 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 CBFBQ13951 182 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 TLR1Q15399 786 aa11.15□□□□□ -0.62
TTC28-201ENST00000397906 GPR65Q8IYL9 337 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms