RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 SDC3O75056 442 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 CDC123O75794 336 aaPredicted RBP7.95□□□□□ -1.14
CKAP2-203ENST00000378037 POP7O75817 140 aaKnown RBP7.95□□□□□ -1.14
CKAP2-203ENST00000378037 GNRH1P01148 92 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 PRLP01236 227 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 LMNAP02545 664 aaKnown RBP7.95□□□□□ -1.14
CKAP2-203ENST00000378037 S100A3P33764 101 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 CHI3L1P36222 383 aaPredicted RBP7.95□□□□□ -1.14
CKAP2-203ENST00000378037 GSCP56915 257 aaPredicted RBP7.95□□□□□ -1.14
CKAP2-203ENST00000378037 RPS26P62854 115 aaKnown RBP7.95□□□□□ -1.14
CKAP2-203ENST00000378037 OCA2Q04671 838 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 DGCR6Q14129 220 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 TBCCQ15814 346 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 REP15Q6BDI9 236 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 LETMD1Q6P1Q0 360 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 ADAMTSL2Q86TH1 951 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 LRRC49Q8IUZ0 686 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 CANT1Q8WVQ1 401 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 C12orf66Q96MD2 445 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 TSPAN18Q96SJ8 248 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 TMEM79Q9BSE2 394 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 HTATIP2Q9BUP3 242 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 GRIP2Q9C0E4 1043 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 ELAC1Q9H777 363 aaKnown RBP7.95□□□□□ -1.14
CKAP2-203ENST00000378037 PRDM16Q9HAZ2 1276 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 WBP1LQ9NX94 342 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 NDOR1Q9UHB4 597 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 VPS9D1Q9Y2B5 631 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 PIKFYVEQ9Y2I7 2098 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 SDHDO14521 159 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 UBFD1O14562 309 aaKnown RBP7.94□□□□□ -1.14
CKAP2-203ENST00000378037 NOBOXO60393 691 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 SLC22A3O75751 556 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 ZNF135P52742 658 aaPredicted RBP7.94□□□□□ -1.14
CKAP2-203ENST00000378037 AP1S1P61966 158 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 HERVK_113P63132 956 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 SMARCB1Q12824 385 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 RFTN2Q52LD8 501 aaPredicted RBP7.94□□□□□ -1.14
CKAP2-203ENST00000378037 NUDT18Q6ZVK8 323 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 HEATR4Q86WZ0 1026 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 TCEAL8Q8IYN2 117 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 TMEM145Q8NBT3 493 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 PKMYT1Q99640 499 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 DPH2Q9BQC3 489 aaPredicted RBP7.94□□□□□ -1.14
CKAP2-203ENST00000378037 ERVK-6Q9BXR3 956 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 CARS2Q9HA77 564 aaKnown RBP7.94□□□□□ -1.14
CKAP2-203ENST00000378037 IGSF5Q9NSI5 407 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 EURLQ9NYK6 297 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 IL36AQ9UHA7 158 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 TAC3Q9UHF0 121 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 POLG2Q9UHN1 485 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 LNPEPQ9UIQ6 1025 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 ZNF451Q9Y4E5 1061 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 ARIH1Q9Y4X5 557 aaPredicted RBP7.94□□□□□ -1.14
CKAP2-203ENST00000378037 LCTP09848 1927 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 ANKDD1BA6NHY2 528 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 H7BY64 318 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 OAS1P00973 400 aaKnown RBP7.94□□□□□ -1.14
CKAP2-203ENST00000378037 DNTTP04053 509 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 PSMB5P28074 263 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 ACTR1BP42025 376 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 ACTR1AP61163 376 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 MS4A2Q01362 244 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 RING1Q06587 406 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 HSPB3Q12988 150 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 PON2Q15165 354 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 ZNF678Q5SXM1 525 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 EGFLAMQ63HQ2 1017 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 OR4F3Q6IEY1 312 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 ENPP7Q6UWV6 458 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 GOLGA7Q7Z5G4 137 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 YTHDF3Q7Z739 585 aaKnown RBP7.94□□□□□ -1.14
CKAP2-203ENST00000378037 RELL1Q8IUW5 271 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 NXPE1Q8N323 547 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 ZNF740Q8NDX6 193 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 C7orf57Q8NEG2 295 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 HERVK_113Q902F9 699 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 TSACCQ96A04 125 aaPredicted RBP7.94□□□□□ -1.14
CKAP2-203ENST00000378037 FUBP1Q96AE4 644 aaKnown RBP7.94□□□□□ -1.14
CKAP2-203ENST00000378037 SKA1Q96BD8 255 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 PRAP1Q96NZ9 151 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 IL17CQ9P0M4 197 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 AASSQ9UDR5 926 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 ACSL6Q9UKU0 697 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 ERVW-1Q9UQF0 538 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 BACE2Q9Y5Z0 518 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 SQORQ9Y6N5 450 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 CHD9Q3L8U1 2897 aa7.94□□□□□ -1.14
CKAP2-203ENST00000378037 WNT9AO14904 365 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 GRID2O43424 1007 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 KAT7O95251 611 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 SLC16A8O95907 504 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 TNFRSF1BP20333 461 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 AK4P27144 223 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 PTGER3P43115 390 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 CDH15P55291 814 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 PRMT2P55345 433 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 NFKB2Q00653 900 aa7.93□□□□□ -1.14
CKAP2-203ENST00000378037 TMEM115Q12893 351 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-203ENST00000378037 LAMB3Q13751 1172 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms