RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 LIPEQ05469 1076 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 FADDQ13158 208 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 CUZD1Q86UP6 607 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 PROSER1Q86XN7 944 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 FBXL6Q8N531 539 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 GTF2H4Q92759 462 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 RPL10LQ96L21 214 aaKnown RBP11.94□□□□□ -0.5
C9orf3-203ENST00000375315 GDF15Q99988 308 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 APOL4Q9BPW4 351 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 NTN4Q9HB63 628 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 MRM3Q9HC36 420 aaKnown RBP11.94□□□□□ -0.5
C9orf3-203ENST00000375315 NSMCE4AQ9NXX6 385 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 EHD3Q9NZN3 535 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 RAPGEFL1Q9UHV5 662 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 PCDHGB6Q9Y5F9 930 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 PCDHA9Q9Y5H5 950 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 OR5K3A6NET4 321 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 HACD1B0YJ81 288 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 G3V2T6 193 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 CAPN5O15484 640 aaPredicted RBP11.93□□□□□ -0.5
C9orf3-203ENST00000375315 MT-CO1P00395 513 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 CES1P23141 567 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 YWHAQP27348 245 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 GGT5P36269 586 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 ARL4AP40617 200 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 EFEMP1Q12805 493 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 ACAP2Q15057 778 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 EML3Q32P44 896 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 SLC25A52Q3SY17 297 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 PYCR3Q53H96 274 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 LIMS2Q7Z4I7 341 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 KCTD20Q7Z5Y7 419 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 GALNT7Q86SF2 657 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.93□□□□□ -0.5
C9orf3-203ENST00000375315 LRRC20Q8TCA0 184 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 NSMCE2Q96MF7 247 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 SMOC2Q9H3U7 446 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 WDCPQ9H6R7 721 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 PCDHB8Q9UN66 801 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 I6L893 689 aaPredicted RBP11.93□□□□□ -0.5
C9orf3-203ENST00000375315 MEN1O00255 615 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 TULP3O75386 442 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 SEMA3DO95025 777 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 SLC35E2BP0CK96 405 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 TCF3P15923 654 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 NOS2P35228 1153 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 SOX11P35716 441 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 UGT2B10P36537 528 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 IL12RB1P42701 662 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 MAP2K4P45985 399 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 MVKQ03426 396 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 KCNAB2Q13303 367 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 TAF12Q16514 161 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 Q5BKY6 102 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 TSTD2Q5T7W7 516 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 NXNL2Q5VZ03 156 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 ZNF470Q6ECI4 717 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 VN1R5Q7Z5H4 357 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 TMEM135Q86UB9 458 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 TAC4Q86UU9 113 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 NLGN4XQ8N0W4 816 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 CACTIN-AS1Q8N1I8 211 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 TXNDC5Q8NBS9 432 aaKnown RBP11.93□□□□□ -0.5
C9orf3-203ENST00000375315 RNF139Q8WU17 664 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 NUP205Q92621 2012 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 ZNF566Q969W8 418 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 MARVELD3Q96A59 401 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 RNF170Q96K19 258 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 PSKH2Q96QS6 385 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 MRPL57Q9BQC6 102 aaKnown RBP11.93□□□□□ -0.5
C9orf3-203ENST00000375315 OSBPL2Q9H1P3 480 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 RHOJQ9H4E5 214 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 USE1Q9NZ43 259 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 MAT2BQ9NZL9 334 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 ERVK-18Q9QC07 812 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 TEKT2Q9UIF3 430 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 RWDD3Q9Y3V2 267 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 CLDN24A6NM45 220 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 KCNK1O00180 336 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 XPNPEP2O43895 674 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 CPNE3O75131 537 aaKnown RBP11.93□□□□□ -0.5
C9orf3-203ENST00000375315 ANGPTL1O95841 491 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 GLULP15104 373 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 CD36P16671 472 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 CAPN3P20807 821 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 PSMB4P28070 264 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 ISL1P61371 349 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 POU6F2P78424 691 aaPredicted RBP11.93□□□□□ -0.5
C9orf3-203ENST00000375315 NFYCQ13952 458 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 DENND5AQ6IQ26 1287 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.93□□□□□ -0.5
C9orf3-203ENST00000375315 RBM23Q86U06 439 aaKnown RBP11.93□□□□□ -0.5
C9orf3-203ENST00000375315 CENPLQ8N0S6 344 aaPredicted RBP11.93□□□□□ -0.5
C9orf3-203ENST00000375315 MIER2Q8N344 545 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 RPL3LQ92901 407 aaKnown RBP11.93□□□□□ -0.5
C9orf3-203ENST00000375315 TMEM125Q96AQ2 219 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 CCDC126Q96EE4 140 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 UROC1Q96N76 676 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 MBOAT4Q96T53 435 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 AMBRA1Q9C0C7 1298 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms