RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 SEMA6CQ9H3T2 930 aa14.44□□□□□ -0.1
COL9A1-204ENST00000370496 SRMSQ9H3Y6 488 aa14.44□□□□□ -0.1
COL9A1-204ENST00000370496 SMYD2Q9NRG4 433 aa14.44□□□□□ -0.1
COL9A1-204ENST00000370496 LATS2Q9NRM7 1088 aa14.44□□□□□ -0.1
COL9A1-204ENST00000370496 NINJ2Q9NZG7 142 aa14.44□□□□□ -0.1
COL9A1-204ENST00000370496 OGFRQ9NZT2 677 aa14.44□□□□□ -0.1
COL9A1-204ENST00000370496 AKAP7Q9P0M2 348 aaPredicted RBP14.44□□□□□ -0.1
COL9A1-204ENST00000370496 TMEM9Q9P0T7 183 aa14.44□□□□□ -0.1
COL9A1-204ENST00000370496 RUVBL2Q9Y230 463 aaKnown RBP14.44□□□□□ -0.1
COL9A1-204ENST00000370496 MN1Q10571 1320 aaPredicted RBP14.44□□□□□ -0.1
COL9A1-204ENST00000370496 CCDC187A0A096LP49 1063 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 IGHV5-10-1A0A0J9YXX1 117 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 FAM95CA0A1B0GW59 222 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 FAM221BA6H8Z2 402 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 OR5K3A6NET4 321 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 FAM159BA6NKW6 160 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 AGRPO00253 132 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 ACSL3O95573 720 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 THRAP10827 490 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 ENO3P13929 434 aaPredicted RBP14.43□□□□□ -0.1
COL9A1-204ENST00000370496 HOXB3P14651 431 aaPredicted RBP14.43□□□□□ -0.1
COL9A1-204ENST00000370496 SAT1P21673 171 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 MCM3P25205 808 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 BDKRB1P46663 353 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 LIMK2P53671 638 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 CDKN2DP55273 166 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 GFERP55789 205 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 PRKAA1Q13131 559 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 SQSTM1Q13501 440 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 NAB1Q13506 487 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 GBX1Q14549 363 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 KYNUQ16719 465 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 KBTBD12Q3ZCT8 623 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 HECTD2Q5U5R9 776 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 TTC23LQ6PF05 361 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 FOXR1Q6PIV2 292 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 ZC3HC1Q86WB0 502 aaKnown RBP14.43□□□□□ -0.1
COL9A1-204ENST00000370496 RELL1Q8IUW5 271 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 GSPT2Q8IYD1 628 aaKnown RBP14.43□□□□□ -0.1
COL9A1-204ENST00000370496 CPNE9Q8IYJ1 553 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 RCBTB1Q8NDN9 531 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 INPP5DQ92835 1189 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 LIN37Q96GY3 246 aaPredicted RBP14.43□□□□□ -0.1
COL9A1-204ENST00000370496 VPS39Q96JC1 886 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 TGM7Q96PF1 710 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 SLC30A3Q99726 388 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 CPNE1Q99829 537 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 RHOJQ9H4E5 214 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 KLHL42Q9P2K6 505 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 MED16Q9Y2X0 877 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 DHRS7Q9Y394 339 aa14.43□□□□□ -0.1
COL9A1-204ENST00000370496 GSAPA4D1B5 854 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 OR6C74A6NCV1 312 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 CXorf49A8MYA2 514 aaPredicted RBP14.42□□□□□ -0.1
COL9A1-204ENST00000370496 CAPN5O15484 640 aaPredicted RBP14.42□□□□□ -0.1
COL9A1-204ENST00000370496 RASSF9O75901 435 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 SLU7O95391 586 aaKnown RBP14.42□□□□□ -0.1
COL9A1-204ENST00000370496 CBSLP0DN79 551 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 SHMT2P34897 504 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 CBSP35520 551 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 GP5P40197 560 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 CCNFP41002 786 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 RGS4P49798 205 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 GABREP78334 506 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 CFHR1Q03591 330 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 ZFP36L1Q07352 338 aaKnown RBP14.42□□□□□ -0.1
COL9A1-204ENST00000370496 ILF2Q12905 390 aaKnown RBP14.42□□□□□ -0.1
COL9A1-204ENST00000370496 EIF3IQ13347 325 aaKnown RBP14.42□□□□□ -0.1
COL9A1-204ENST00000370496 TRA2AQ13595 282 aaKnown RBP eCLIP14.42□□□□□ -0.1
COL9A1-204ENST00000370496 SLMAPQ14BN4 828 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 EFTUD2Q15029 972 aaKnown RBP eCLIP14.42□□□□□ -0.1
COL9A1-204ENST00000370496 KLHL38Q2WGJ6 581 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 LRRC8EQ6NSJ5 796 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 AMIGO1Q86WK6 493 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 PPM1NQ8N819 430 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 OR4E2Q8NGC2 313 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 WDR36Q8NI36 951 aaKnown RBP14.42□□□□□ -0.1
COL9A1-204ENST00000370496 ZDHHC12Q96GR4 267 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 XKR8Q9H6D3 395 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 HRASLS2Q9NWW9 162 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 PLAGL1Q9UM63 463 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 SATB2Q9UPW6 733 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 ICKQ9UPZ9 632 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 LOXL2Q9Y4K0 774 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 NFS1Q9Y697 457 aa14.42□□□□□ -0.1
COL9A1-204ENST00000370496 A8MU76 341 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 EIF3FO00303 357 aaPredicted RBP14.41□□□□□ -0.1
COL9A1-204ENST00000370496 MATN2O00339 956 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 MPOP05164 745 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 JMJD7P0C870 316 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 FDXRP22570 491 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 SKIV2L2P42285 1042 aaKnown RBP14.41□□□□□ -0.1
COL9A1-204ENST00000370496 SLC12A2P55011 1212 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 PPP1CAP62136 330 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 ZNF574Q6ZN55 896 aaPredicted RBP14.41□□□□□ -0.1
COL9A1-204ENST00000370496 FAM92BQ6ZTR7 304 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 NEK10Q6ZWH5 1172 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 CYS1Q717R9 158 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 RAB11FIP2Q7L804 512 aa14.41□□□□□ -0.1
COL9A1-204ENST00000370496 PIWIL4Q7Z3Z4 852 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms