RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 ATP6V1B2P21281 511 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 SLC6A2P23975 617 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 HSD17B2P37059 387 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 HNF4AP41235 474 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 CASP2P42575 452 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 CCT8P50990 548 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 EPHA5P54756 1037 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 RAB15P59190 212 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 ERVPABLB-1P60509 514 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 RPL38P63173 70 aaKnown RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 ECT2LQ008S8 904 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 RALGDSQ12967 914 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 TRAF3Q13114 568 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 BOP1Q14137 746 aaKnown RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 GPNMBQ14956 572 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 CHRNA6Q15825 494 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 MAPKAPK3Q16644 382 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 HIST2H2ACQ16777 129 aaPredicted RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 PAGE2BQ5JRK9 111 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 ATXN7L2Q5T6C5 722 aaPredicted RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 AP1ARQ63HQ0 302 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 HIST2H2AA3Q6FI13 130 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 HIPK1Q86Z02 1210 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 HMGCLL1Q8TB92 370 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 SNRNP27Q8WVK2 155 aaKnown RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 GLMNQ92990 594 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 SLC47A1Q96FL8 570 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 C3orf30Q96M34 536 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 SAMD11Q96NU1 681 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 NSUN5Q96P11 429 aaKnown RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 DEFB118Q96PH6 123 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 ACOX2Q99424 681 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 BCL7BQ9BQE9 202 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 ASPSCR1Q9BZE9 553 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 RNF38Q9H0F5 515 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 MTIF3Q9H2K0 278 aaKnown RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 TUBB1Q9H4B7 451 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 ZDHHC6Q9H6R6 413 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 RC3H2Q9HBD1 1191 aaKnown RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 ZNF334Q9HCZ1 680 aaPredicted RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 GKN1Q9NS71 199 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 ARL15Q9NXU5 204 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 FAM8A1Q9UBU6 413 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 RSL24D1Q9UHA3 163 aaKnown RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 IL36AQ9UHA7 158 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 ENOPH1Q9UHY7 261 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 TBX21Q9UL17 535 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 HSPE1-MOB4S4R3N1 261 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 ELOVL7A1L3X0 281 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 CCDC160A6NGH7 325 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 GNGT2O14610 69 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 KIAA0355O15063 1070 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 ADAM12O43184 909 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 OR1I1O60431 355 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 ADH1CP00326 375 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 CATP04040 527 aaKnown RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 RPN2P04844 631 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 RB1P06400 928 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 ZNF26P17031 533 aaPredicted RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 RPL17P18621 184 aaKnown RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 S100A3P33764 101 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 RPS9P46781 194 aaKnown RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 ALDH3A2P51648 485 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 CCL23P55773 120 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 MERTKQ12866 999 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 TUBA3CQ13748 450 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 GBX1Q14549 363 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 CDKN3Q16667 212 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 TRIM60Q495X7 471 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 SETMARQ53H47 684 aaPredicted RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 SPIN4Q56A73 249 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 RNF220Q5VTB9 566 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 GLYATQ6IB77 296 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 FBXL19Q6PCT2 694 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 CRTC1Q6UUV9 634 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 LINGO4Q6UY18 593 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.65□□□□□ -1.83
RNF38-203ENST00000353739 NECAB2Q7Z6G3 386 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 PATL1Q86TB9 770 aaKnown RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 TMC8Q8IU68 726 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 SPPL2CQ8IUH8 684 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 ADGRG5Q8IZF4 528 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 PGBD3Q8N328 593 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 SFRP1Q8N474 314 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 RAB42Q8N4Z0 105 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 L3MBTL4Q8NA19 623 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 FBXO15Q8NCQ5 510 aaPredicted RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 KREMEN2Q8NCW0 462 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 OR2T12Q8NG77 320 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 CLP1Q92989 425 aaKnown RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 ZNF514Q96K75 400 aaPredicted RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 ZIC5Q96T25 663 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 ADI1Q9BV57 179 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 ACTR8Q9H981 624 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 IL21Q9HBE4 155 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 IL23AQ9NPF7 189 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 FAM120CQ9NX05 1096 aaKnown RBP3.65□□□□□ -1.83
RNF38-203ENST00000353739 TMEM9Q9P0T7 183 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 MAP10Q9P2G4 905 aa3.65□□□□□ -1.83
RNF38-203ENST00000353739 CIDEBQ9UHD4 219 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms