RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 GALNT13Q8IUC8 556 aa10.1□□□□□ -0.79
TPM3-207ENST00000341372 PRR18Q8N4B5 295 aa10.1□□□□□ -0.79
TPM3-207ENST00000341372 KYQ8NBH2 561 aa10.1□□□□□ -0.79
TPM3-207ENST00000341372 OR4K2Q8NGD2 314 aa10.1□□□□□ -0.79
TPM3-207ENST00000341372 HDAC2Q92769 488 aaKnown RBP10.1□□□□□ -0.79
TPM3-207ENST00000341372 NAT6Q93015 286 aa10.1□□□□□ -0.79
TPM3-207ENST00000341372 ARL8AQ96BM9 186 aa10.1□□□□□ -0.79
TPM3-207ENST00000341372 SCNM1Q9BWG6 230 aa10.1□□□□□ -0.79
TPM3-207ENST00000341372 AP1M1Q9BXS5 423 aa10.1□□□□□ -0.79
TPM3-207ENST00000341372 ATXN10Q9UBB4 475 aa10.1□□□□□ -0.79
TPM3-207ENST00000341372 MOSPD1Q9UJG1 213 aa10.1□□□□□ -0.79
TPM3-207ENST00000341372 KLK13Q9UKR3 277 aa10.1□□□□□ -0.79
TPM3-207ENST00000341372 GPR34Q9UPC5 381 aa10.1□□□□□ -0.79
TPM3-207ENST00000341372 PRR19A6NJB7 356 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 BUD23O43709 281 aaKnown RBP10.09□□□□□ -0.79
TPM3-207ENST00000341372 VEGFDO43915 354 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 SLC25A14O95258 325 aaPredicted RBP10.09□□□□□ -0.79
TPM3-207ENST00000341372 ZNF8P17098 575 aaPredicted RBP10.09□□□□□ -0.79
TPM3-207ENST00000341372 KCNJ1P48048 391 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 CLCNKAP51800 687 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 MAPK10P53779 464 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 E2F1Q01094 437 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 CTBSQ01459 385 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 CDH17Q12864 832 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 ITGA9Q13797 1035 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 PTPRCAPQ14761 206 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 CHRNA6Q15825 494 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 KHDC1Q4VXA5 237 aaKnown RBP10.09□□□□□ -0.79
TPM3-207ENST00000341372 DHRS13Q6UX07 377 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 FAM151BQ6UXP7 276 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 TAF8Q7Z7C8 310 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 TMPRSS12Q86WS5 348 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 GALNT15Q8N3T1 639 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.09□□□□□ -0.792e-8■■■■□ 26.5
TPM3-207ENST00000341372 IFI44Q8TCB0 444 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 LRTOMTQ8WZ04 291 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 TAAR2Q9P1P5 351 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 APPL1Q9UKG1 709 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 RIMKLBQ9ULI2 386 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 NEU2Q9Y3R4 380 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 KCTD3Q9Y597 815 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 AKAP13Q12802 2813 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 MROH6A6NGR9 719 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 PHF2O75151 1096 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 KRT37O76014 449 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 PRAMEF1O95521 474 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 THBDP07204 575 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 MYF5P13349 255 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 AK4P27144 223 aaPredicted RBP10.09□□□□□ -0.79
TPM3-207ENST00000341372 CA5AP35218 305 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 HADHAP40939 763 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 MAGEA6P43360 314 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 FNTAP49354 379 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 INSM1Q01101 510 aaPredicted RBP10.09□□□□□ -0.79
TPM3-207ENST00000341372 PEX6Q13608 980 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 PGS1Q32NB8 556 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 LDLRAP1Q5SW96 308 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 PRAMEF13Q5VWM6 474 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 CCNI2Q6ZMN8 369 aaPredicted RBP10.09□□□□□ -0.79
TPM3-207ENST00000341372 MARK2Q7KZI7 788 aaKnown RBP10.09□□□□□ -0.79
TPM3-207ENST00000341372 CREG2Q8IUH2 290 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 CCDC103Q8IW40 242 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 NKAIN3Q8N8D7 197 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 OR6C4Q8NGE1 309 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 OR52K1Q8NGK4 314 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 OR13C4Q8NGS5 318 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 RANBP9Q96S59 729 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 SPATS2LQ9NUQ6 558 aaKnown RBP10.09□□□□□ -0.79
TPM3-207ENST00000341372 SMARCAL1Q9NZC9 954 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 PADI4Q9UM07 663 aa10.09□□□□□ -0.79
TPM3-207ENST00000341372 IGF2RP11717 2491 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 BPTFQ12830 3046 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 GRID2O43424 1007 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 KDM1AO60341 852 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 SRP72O76094 671 aaKnown RBP10.08□□□□□ -0.8
TPM3-207ENST00000341372 CSTBP04080 98 aaKnown RBP10.08□□□□□ -0.8
TPM3-207ENST00000341372 PNLIPP16233 465 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 SPINK2P20155 84 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 TPSB2P20231 275 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 COILP38432 576 aaPredicted RBP10.08□□□□□ -0.8
TPM3-207ENST00000341372 MTNR1BP49286 362 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 AGFG1P52594 562 aaKnown RBP10.08□□□□□ -0.8
TPM3-207ENST00000341372 CDK16Q00536 496 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 C19orf57Q0VDD7 668 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 NFATC2Q13469 925 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 NR1D2Q14995 579 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 TPSAB1Q15661 275 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 C14orf28Q4W4Y0 310 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 CERCAMQ5T4B2 595 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 GPRC6AQ5T6X5 926 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 RIPOR1Q6ZS17 1223 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 EFL1Q7Z2Z2 1120 aaKnown RBP10.08□□□□□ -0.8
TPM3-207ENST00000341372 FAM46DQ8NEK8 389 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 STYXQ8WUJ0 223 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 GATA6Q92908 595 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 MAGOHBQ96A72 148 aaKnown RBP10.08□□□□□ -0.8
TPM3-207ENST00000341372 DNAJC1Q96KC8 554 aaKnown RBP10.08□□□□□ -0.8
TPM3-207ENST00000341372 TIMM29Q9BSF4 260 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 MCMBPQ9BTE3 642 aa10.08□□□□□ -0.8
TPM3-207ENST00000341372 OR2AG1Q9H205 316 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms