RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 RHOJQ9H4E5 214 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 RUBCNLQ9H714 662 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 CHURC1-FNTBB4DL54 471 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 TCP11X1B4DZS4 312 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 MYO1CO00159 1063 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 MGRN1O60291 552 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 NDST3O95803 873 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 DCNP07585 359 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 PIM1P11309 404 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 PGAM1P18669 254 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 MAOBP27338 520 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 PPP2R2AP63151 447 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 BASP1P80723 227 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 DMPKQ09013 629 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 PRPSAP1Q14558 356 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 NR1D2Q14995 579 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 HADHQ16836 314 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 TMEM255AQ5JRV8 349 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 ZNF362Q5T0B9 420 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 RNF165Q6ZSG1 346 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 BZW1Q7L1Q6 419 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 TRIM46Q7Z4K8 759 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 PTAR1Q7Z6K3 402 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 MIEF2Q96C03 454 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 DRC3Q9H069 523 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 DENND2DQ9H6A0 471 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 KLHL20Q9Y2M5 609 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 DHRS7Q9Y394 339 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 COPG1Q9Y678 874 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 ARHGAP10A1A4S6 786 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 SOBPA7XYQ1 873 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 KIF1CO43896 1103 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 PRLHRP49683 370 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 SMARCB1Q12824 385 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 ABRQ12979 859 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 INPP5AQ14642 412 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 PUM1Q14671 1186 aaKnown RBP eCLIP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 IRF4Q15306 451 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 CCDC6Q16204 474 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 UGT8Q16880 541 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 DPY19L1Q2PZI1 675 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 N4BP2L1Q5TBK1 243 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 FAM151BQ6UXP7 276 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 SLCO6A1Q86UG4 719 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 OR5AR1Q8NGP9 310 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 SHCBP1LQ9BZQ2 653 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 VCXQ9H320 206 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 MEAF6Q9HAF1 191 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 ITM2CQ9NQX7 267 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 HOMER3Q9NSC5 361 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 FBXO34Q9NWN3 711 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 CMTM6Q9NX76 183 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 UBAP1Q9NZ09 502 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 C4orf47A7E2U8 309 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 E7EQ34 232 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 AP3B1O00203 1094 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 PHBP35232 272 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 TUFMP49411 452 aaKnown RBP5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 SCNN1BP51168 640 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 MVKQ03426 396 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 ALS2CLQ60I27 953 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 ZNF470Q6ECI4 717 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 LVRNQ6Q4G3 990 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 CYP2U1Q7Z449 544 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 SLC26A11Q86WA9 606 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 TRIM42Q8IWZ5 723 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 ZBTB44Q8NCP5 570 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 NEIL2Q969S2 332 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 APOPT1Q96IL0 206 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 SLC6A18Q96N87 628 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 OR2A14Q96R47 310 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 PAK1IP1Q9NWT1 392 aaPredicted RBP5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 OBP2AQ9NY56 170 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 LMCD1Q9NZU5 365 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 PAK5Q9P286 719 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 ASB3Q9Y575 518 aa5.46□□□□□ -1.53
TOPBP1-201ENST00000260810 NME4O00746 187 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 MMP20O60882 483 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 IGSF6O95976 241 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 PTGR1Q14914 329 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 USP39Q53GS9 565 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 COX15Q7KZN9 410 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 PID1Q7Z2X4 250 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNRF4Q8WWF5 429 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 SEC16BQ96JE7 1060 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 HDAC8Q9BY41 377 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 MFRPQ9BY79 579 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 BRINP2Q9C0B6 783 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 WSB2Q9NYS7 404 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 CD207Q9UJ71 328 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 TMEM98Q9Y2Y6 226 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 PKD1P98161 4303 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 RGSL1A5PLK6 1076 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 NUAK1O60285 661 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 RECQL5O94762 991 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 KLHL2O95198 593 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 C1orf105O95561 183 aa5.46□□□□□ -1.54
TOPBP1-201ENST00000260810 F9P00740 461 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms