RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 TSPAN33Q86UF1 283 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 COG8Q96MW5 612 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 FEM1AQ9BSK4 669 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 HPS4Q9NQG7 708 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 TMEM88BA6NKF7 163 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 DLGAP1O14490 977 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 OR7A17O14581 309 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 ACOX3O15254 700 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 B3GALT4O96024 378 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 GLUD1P00367 558 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 IGLV3-27P01718 113 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 SHMT2P34897 504 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 ALDH3A2P51648 485 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 XKR7Q5GH72 579 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 ZCCHC8Q6NZY4 707 aaKnown RBP12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 TMCO2Q7Z6W1 182 aaPredicted RBP12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 APCDD1Q8J025 514 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 TSPEARQ8WU66 669 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 TPD52L3Q96J77 140 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 SLC22A12Q96S37 553 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 ARMC7Q9H6L4 198 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 ZDHHC6Q9H6R6 413 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 LSM7Q9UK45 103 aaKnown RBP12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 hCG_2039718K7EN88 272 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 LSM1O15116 133 aaKnown RBP12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 ABCB1P08183 1280 aaPredicted RBP12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 PSMB9P28065 219 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 WEE1P30291 646 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 POLR2IP36954 125 aaKnown RBP12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 OCA2Q04671 838 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 MAD2L1Q13257 205 aaPredicted RBP12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 KCNAB2Q13303 367 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 COQ5Q5HYK3 327 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 ARTNQ5T4W7 220 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 CERS6Q6ZMG9 384 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 UBE2R2Q712K3 238 aaPredicted RBP12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 TTC30BQ8N4P2 665 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 TMCO5AQ8N6Q1 288 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 SNX19Q92543 992 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 SH3GL1Q99961 368 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 PTBP2Q9UKA9 531 aaKnown RBP12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 TMEM189-UBE2V1I3L0A0 370 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 K7EPI3 171 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 TULP3O75386 442 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 SEC24AO95486 1093 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 TTKP33981 857 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 CYP4F8P98187 520 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 SP3Q02447 781 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 NFATC2Q13469 925 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 SPRED1Q7Z699 444 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 HORMAD1Q86X24 394 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 ADHFE1Q8IWW8 467 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 ATG16L2Q8NAA4 619 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 GLMNQ92990 594 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 DUS3LQ96G46 650 aaKnown RBP12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 SPATA17Q96L03 361 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 BRINP2Q9C0B6 783 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 PCDHB3Q9Y5E6 796 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 SLC28A1O00337 649 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 RFXANKO14593 260 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 XPNPEP2O43895 674 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 CLCN7P51798 805 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 RAD23AP54725 363 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 CASP9P55211 416 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 TRIM71Q2Q1W2 868 aaKnown RBP12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 PERM1Q5SV97 790 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 ACBD5Q5T8D3 534 aaPredicted RBP12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 NCEH1Q6PIU2 408 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 SBSNQ6UWP8 590 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 NPAS4Q8IUM7 802 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 TMEM132CQ8N3T6 1108 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 HJURPQ8NCD3 748 aaPredicted RBP12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 WFDC5Q8TCV5 224 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 FRS2Q8WU20 508 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 FATE1Q969F0 183 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 PLD4Q96BZ4 506 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 MED8Q96G25 268 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 IKZF5Q9H5V7 419 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 PCDH12Q9NPG4 1184 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 RASSF1Q9NS23 344 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 MYO16Q9Y6X6 1858 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 M0R3G1 203 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 XYLBO75191 536 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 UGT2B4P06133 528 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 CD247P20963 164 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 AGXTP21549 392 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 PBLDP30039 288 aaPredicted RBP12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 HMGCLP35914 325 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 STK19P49842 368 aaPredicted RBP12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 NR1D2Q14995 579 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 DOK6Q6PKX4 331 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 RNF175Q8N4F7 328 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 TADA1Q96BN2 335 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 COPS8Q99627 209 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 MYOCQ99972 504 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 IL26Q9NPH9 171 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 C1orf109Q9NX04 203 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 ELOVL2Q9NXB9 296 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 C3orf18Q9UK00 162 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 PDE10AQ9Y233 779 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms