RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Zc3h12aQ5D1E7 596 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Havcr1Q5QNS5 305 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Itm2aQ61500 263 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Tbx10Q810F8 385 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Cpped1Q8BFS6 312 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Cabs1Q8C633 391 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 BtdQ8CIF4 520 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Irf2bp1Q8R3Y8 584 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Olfr806Q8VFI2 313 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Olfr853Q8VGG6 305 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Wdr73Q9CWR1 371 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 2010109A12RikQ9D875 119 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Bpifa3Q9D9J8 232 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Pdpk1Q9Z2A0 559 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Cfap54Q8C6S9 3106 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Olfr634-ps1A0A1B0GRN7 318 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Klhl41A2AUC9 606 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Trgv2A2J008 116 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 MipepA6H611 711 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Gm3173A6NAS3 172 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Slc9a3G3X939 829 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Zfp809G3X9G7 402 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 PdynO35417 248 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Inf2Q0GNC1 1273 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Rbbp7Q60973 425 aaKnown RBP9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Larp4bQ6A0A2 741 aaKnown RBP9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Pcdh8Q7TSK3 1070 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Als2cr12Q8BVM7 383 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Rab44Q8CB87 725 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 SuoxQ8R086 546 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Vps37cQ8R105 352 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Tekt2Q922G7 430 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 3300002I08RikQ9CXH3 147 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 MispQ9D279 648 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Trpc4apQ9JLV2 797 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Tcrg-V3A0A0G2JEW2 117 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Wdr49A0A0N4SUK7 710 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Kpna7C0LLJ0 499 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Gm45837F7D3W5 961 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Igkv7-33P01632 114 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Sod2P09671 222 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Pou4f1P17208 421 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 GhrhrP32082 423 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Ccr3P51678 359 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Ctps2P70303 586 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Zdhhc18Q5Y5T2 380 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Adam2Q60718 735 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 VclQ64727 1066 aaKnown RBP9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 N4bp1Q6A037 893 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Q6P1I3 445 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Fjx1Q8BQB4 450 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Cmtr2Q8BWQ4 767 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 4932414N04RikQ8CEQ9 752 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Gpr18Q8K1Z6 331 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Ints10Q8K2A7 710 aaKnown RBP9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 ItpkaQ8R071 459 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Olfr868Q8VFI8 309 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Fam13cQ9DBR2 601 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 TrehQ9JLT2 576 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 EcsitQ9QZH6 435 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 H2-BlV9GXR0 257 aa9.72□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 2210016F16RikG3X8U3 338 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Pot1bH7BX60 640 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 AurkcO88445 282 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Cyp2a4P15392 494 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Cyp2a5P20852 494 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Cd36Q08857 472 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Kcnh6Q32ME0 950 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Q3KNL4 93 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Slc30a10Q3UVU3 470 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Muc19Q6JHY2 733 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Sec24dQ6NXL1 1032 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 ManealQ6P1J0 452 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Scn4bQ7M729 228 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 H2-M10.5Q85ZW7 330 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Kansl2Q8BQR4 486 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Fbxl8Q8CIG9 374 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Olfr690Q8VH18 315 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 FopnlQ9CZS3 174 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Gpn3Q9D3W4 284 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Prss23Q9D6X6 382 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Cldn22Q9D7U6 220 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Amdhd1Q9DBA8 426 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 A0A286YDP4 300 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 NuggcD3YWJ0 796 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Cyp1a1P00184 524 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Mtnd3P03899 115 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 KitP05532 979 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Scg5P12961 212 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Tgfb3P17125 410 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 NxnP97346 435 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Spag6Q3V0U9 509 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Rexo4Q6PAQ4 432 aaKnown RBP9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Abhd10Q6PE15 297 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Ranbp10Q6VN19 620 aaKnown RBP9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Lats2Q7TSJ6 1042 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Znf423Q80TS5 1292 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 R3hcc1lQ8BJM3 775 aaKnown RBP9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Creb5Q8K1L0 357 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Zcchc9Q8R1J3 271 aaKnown RBP9.71□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms