RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 TympQ99N42 471 aa10.67□□□□□ -0.7
Ciita-201ENSMUST00000023147 EcdQ9CS74 641 aa10.67□□□□□ -0.7
Ciita-201ENSMUST00000023147 PlgrktQ9D3P8 147 aa10.67□□□□□ -0.7
Ciita-201ENSMUST00000023147 SgshQ9EQ08 502 aa10.67□□□□□ -0.7
Ciita-201ENSMUST00000023147 Mfsd13bA0A1L1SUA2 455 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Adamts6D3Z1A5 1117 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Dcdc2bF7BCK0 340 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Fabp1P12710 127 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 SnnP61807 88 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Nxpe2Q3U095 558 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Trim40Q3UWA4 246 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 B3gnt3Q5JCS9 372 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Taar7dQ5QD10 358 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Pdcd4Q61823 469 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Il17aQ62386 158 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Mfsd8Q8BH31 519 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Csgalnact1Q8BJQ9 530 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Olfm2Q8BM13 448 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 RhbgQ8BUX5 455 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Slc46a2Q8CA03 479 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Colec10Q8CF98 277 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Txndc11Q8K2W3 948 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Pcdhgb1Q91XX8 918 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Commd4Q9CQ02 199 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Rbm18Q9CR83 190 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Gtf2e2Q9D902 292 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Dnaja2Q9QYJ0 412 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 NumbQ9QZS3 653 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Tnfsf13bQ9WU72 309 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Scn11aQ9R053 1765 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Lrp5Q91VN0 1614 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 TomtA1Y9I9 258 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Vmn2r50E9PW61 861 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Kng1O08677 661 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Cbx4O55187 551 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Zmat1Q3V0C1 714 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Sp140Q6NSQ5 534 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Stx16Q8BVI5 326 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Ago1Q8CJG1 857 aaKnown RBP10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Coq9Q8K1Z0 313 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Slc24a3Q99PD7 645 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Htatip2Q9Z2G9 242 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Gm3259D3YUK0 475 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 UoxP25688 303 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Cyp2f2P33267 491 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 AxlQ00993 888 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Sec31bQ3TZ89 1158 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Fem1cQ8CEF1 617 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Polr1eQ8K202 482 aaKnown RBP10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Grk5Q8VEB1 590 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Dhrs7bQ99J47 323 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 KlbQ99N32 1043 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Rpl14Q9CR57 217 aaKnown RBP10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 P2yr13Q9D8I2 337 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Cyp3a41aQ9JMA7 504 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Dgat1Q9Z2A7 498 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Greb1lB9EJV3 1913 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Cyp2b23E9Q593 491 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 MntO08789 591 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 CatP24270 527 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Acvr2bP27040 536 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Ptpn1P35821 432 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Naa11Q3UX61 218 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Znf512Q69Z99 562 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 N6amt1Q6SKR2 214 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Olfr1355Q7TQU9 310 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Dnajb13Q80Y75 316 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Slc39a9Q8BFU1 308 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Acot4Q8BWN8 421 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 NdnfQ8C119 568 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Ints10Q8K2A7 710 aaKnown RBP10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Dclre1cQ8K4J0 705 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Ces2aQ8QZR3 558 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Pcdha2Q91Y17 948 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Chil4Q91Z98 402 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Dnase1l1Q9D7J6 314 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Tlr6Q9EPW9 795 aa10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Tnrc6cQ3UHC0 1690 aaKnown RBP10.66□□□□□ -0.7
Ciita-201ENSMUST00000023147 Atpif1O35143 106 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 Zfp28P10078 825 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 PtpraP18052 829 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 Bpifa6Q0VGU8 367 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 Ggt1Q60928 568 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 Grik5Q61626 979 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 Mea1Q64327 174 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 MogsQ80UM7 834 aaKnown RBP10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 4930503B20RikQ80ZP0 234 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 Smco3Q8BQM7 225 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 Cacnb2Q8CC27 655 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 Olfr345Q8VGK4 311 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 MispQ9D279 648 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 Prl8a8Q9DAS4 241 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 Fam122aQ9DB52 284 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 Ampd2Q9DBT5 798 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 Acot2Q9QYR9 453 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 Smarcb1Q9Z0H3 385 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 Padi4Q9Z183 666 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 Gm5485A0A1D5RM98 91 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 Olfr239A0PK55 315 aa10.65□□□□□ -0.7
Ciita-201ENSMUST00000023147 Gm13040A2A8C4 496 aa10.65□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 56.2 ms