RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 ERI2A8K979 691 aaKnown RBP11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 LCKP06239 509 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 YES1P07947 543 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 CLEC2LP0C7M8 214 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 FCGR1AP12314 374 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 CCL5P13501 91 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 PGAM1P18669 254 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 PCSK1P29120 753 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 LEPRP48357 1165 aaKnown RBP11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 IDH2P48735 452 aaKnown RBP11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 MPP1Q00013 466 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 SDHAF4Q5VUM1 108 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 ZNF438Q7Z4V0 828 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 NRARPQ7Z6K4 114 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 FAM217AQ8IXS0 508 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 FAM109AQ8N4B1 249 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 OR13J1Q8NGT2 312 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 RNF208Q9H0X6 261 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 MID1IP1Q9NPA3 183 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 UBA2Q9UBT2 640 aaPredicted RBP11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 REV1Q9UBZ9 1251 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 B3GNT3Q9Y2A9 372 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 SNX10Q9Y5X0 201 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 NT5C1B-RDH14C9J2C7 533 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 NME4O00746 187 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 GRID2O43424 1007 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 PSIP1O75475 530 aaKnown RBP11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 DIRAS1O95057 198 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 FHP07954 510 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 SLC15A1P46059 708 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 NUDT6P53370 316 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 GALK2Q01415 458 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 KCNAB2Q13303 367 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 PUS10Q3MIT2 529 aaKnown RBP11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 ZNF404Q494X3 552 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 CYBRD1Q53TN4 286 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 NXNL2Q5VZ03 156 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 NCBP2-AS2Q69YL0 99 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 STRADAQ7RTN6 431 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 CUZD1Q86UP6 607 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 DENND6AQ8IWF6 608 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 TRPV3Q8NET8 790 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 SLC7A14Q8TBB6 771 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 GIPC2Q8TF65 315 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 HTR3CQ8WXA8 447 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 VWCEQ96DN2 955 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 UROC1Q96N76 676 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 NEDD4LQ96PU5 975 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 ALOXE3Q9BYJ1 711 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 ABCG8Q9H221 673 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 VTI1BQ9UEU0 232 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 MAU2Q9Y6X3 613 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 ZNF701M0R085 212 aaPredicted RBP11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 UPK1BO75841 260 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 SNX16P57768 344 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 TUBA3CQ13748 450 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 SQLEQ14534 574 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 GPR68Q15743 365 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 SPDYE7PQ495Y7 208 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 FAM98BQ52LJ0 330 aaKnown RBP11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 IGSF11Q5DX21 431 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 C6orf141Q5SZD1 244 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 MINDY2Q8NBR6 621 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 ANKK1Q8NFD2 765 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 ACMSDQ8TDX5 336 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 BCL7CQ8WUZ0 217 aaPredicted RBP11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 CPNE1Q99829 537 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 ZNF670Q9BS34 389 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 ALG9Q9H6U8 611 aa11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 CRNNQ9UBG3 495 aaPredicted RBP11.66□□□□□ -0.54
RBFOX1-224ENST00000641259 MYO16Q9Y6X6 1858 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 LOC105371267A0A1B0GV96 52 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 EFCAB10A6NFE3 127 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 PLD2O14939 933 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 DLX3O60479 287 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 PLOD3O60568 738 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 FKBP9O95302 570 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 INHBBP09529 407 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 HLA-DPA1P20036 260 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 NOS2P35228 1153 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 SLC26A3P40879 764 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 DGKEP52429 567 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 ARSFP54793 590 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 CD47Q08722 323 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 TOP3AQ13472 1001 aaPredicted RBP11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 NAB1Q13506 487 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 SMN1Q16637 294 aaKnown RBP11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 HIST2H2ACQ16777 129 aaPredicted RBP11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 SLC39A12Q504Y0 691 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 SGO1Q5FBB7 561 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 GRTP1Q5TC63 336 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 TXNDC11Q6PKC3 985 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 RSPO2Q6UXX9 243 aaPredicted RBP11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 TMEM126BQ8IUX1 230 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 LYSMD2Q8IV50 215 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 LSMEM1Q8N8F7 131 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 GPR62Q9BZJ7 368 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 RNF167Q9H6Y7 350 aa11.65□□□□□ -0.54
RBFOX1-224ENST00000641259 CD320Q9NPF0 282 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms