RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 GALNT6Q8NCL4 622 aa16.3■□□□□ 0.2
CACNA1A-259ENST00000638114 TFGQ92734 400 aaPredicted RBP16.3■□□□□ 0.2
CACNA1A-259ENST00000638114 PEX13Q92968 403 aa16.3■□□□□ 0.2
CACNA1A-259ENST00000638114 STAMBPL1Q96FJ0 436 aa16.3■□□□□ 0.2
CACNA1A-259ENST00000638114 MED8Q96G25 268 aa16.3■□□□□ 0.2
CACNA1A-259ENST00000638114 SLC45A3Q96JT2 553 aa16.3■□□□□ 0.2
CACNA1A-259ENST00000638114 EFHD1Q9BUP0 239 aa16.3■□□□□ 0.2
CACNA1A-259ENST00000638114 MVB12BQ9H7P6 319 aa16.3■□□□□ 0.2
CACNA1A-259ENST00000638114 CHRAC1Q9NRG0 131 aa16.3■□□□□ 0.2
CACNA1A-259ENST00000638114 SOHLH2Q9NX45 425 aa16.3■□□□□ 0.2
CACNA1A-259ENST00000638114 ANAPC5Q9UJX4 755 aa16.3■□□□□ 0.2
CACNA1A-259ENST00000638114 RARRES3Q9UL19 164 aa16.3■□□□□ 0.2
CACNA1A-259ENST00000638114 RPS6KL1Q9Y6S9 549 aa16.3■□□□□ 0.2
CACNA1A-259ENST00000638114 F8W8V4 182 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 SPAG6O75602 509 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 ZBTB11O95625 1053 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 PPARGP37231 505 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 VPS41P49754 854 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 TERF1P54274 439 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 HSD11B2P80365 405 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 PRKG2Q13237 762 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 TRIP13Q15645 432 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 TBR1Q16650 682 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 AARS2Q5JTZ9 985 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 FBXO38Q6PIJ6 1188 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 NAPRTQ6XQN6 538 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 OR52E1Q8NGJ3 308 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 PPM1MQ96MI6 270 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 IL22Q9GZX6 179 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 FGF21Q9NSA1 209 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 CATSPERZQ9NTU4 200 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 BFARQ9NZS9 450 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 POMT2Q9UKY4 750 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 TTC7AQ9ULT0 858 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 JRKLQ9Y4A0 524 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 COL6A6A6NMZ7 2263 aa16.29■□□□□ 0.2
CACNA1A-259ENST00000638114 AP3B1O00203 1094 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 MATN2O00339 956 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 TIAF1O95411 115 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 PRKAR1AP10644 381 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 ITGB6P18564 788 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 CDH3P22223 829 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 NPY2RP49146 381 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 CSE1LP55060 971 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 SEMA3AQ14563 771 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 TMTC4Q5T4D3 741 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 LDB1Q86U70 411 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 CARFQ8N187 725 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 D2HGDHQ8N465 521 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 EXD3Q8N9H8 876 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 OR5AR1Q8NGP9 310 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 SGSM3Q96HU1 749 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 MS4A14Q96JA4 679 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 PBKQ96KB5 322 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 NRTNQ99748 197 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 TFB2MQ9H5Q4 396 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 XKR8Q9H6D3 395 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 IL17BQ9UHF5 180 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 ASF1AQ9Y294 204 aa16.28■□□□□ 0.2
CACNA1A-259ENST00000638114 SLC5A10A0PJK1 596 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 GOLGA6L3A6NEY3 463 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 BTN3A3O00478 584 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 BTN3A1O00481 513 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 FAM87AP0C7U9 286 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 TPSB2P20231 275 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 MGAT1P26572 445 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 NMBRP28336 390 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 DLSTP36957 453 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 CDK16Q00536 496 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 PLOD1Q02809 727 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 GPS1Q13098 491 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 TPSAB1Q15661 275 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 GPR19Q15760 415 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 PWWP2BQ6NUJ5 590 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 AMIGO1Q86WK6 493 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 RASGEF1CQ8N431 466 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 STARD8Q92502 1023 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 MAGOHBQ96A72 148 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 TSSK1BQ9BXA7 367 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 AP1M1Q9BXS5 423 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 C1GALT1Q9NS00 363 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 TREX1Q9NSU2 369 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 SYBUQ9NX95 663 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 MARCH4Q9P2E8 410 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 CROTQ9UKG9 612 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 ZNF462Q96JM2 2506 aa16.27■□□□□ 0.2
CACNA1A-259ENST00000638114 TCRBV7S3A2A0A539 114 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 SLC9B1P1A6NJY1 282 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 C2orf74A8MZ97 194 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 BHMG1C9JSJ3 638 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 CD3EAPO15446 510 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 NKX2-8O15522 239 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 MT-ND3P03897 115 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 CCNYL3P0C7X3 344 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 ACADLP28330 430 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 PRDX3P30048 256 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 TTPAP49638 278 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 TUBB4BP68371 445 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 TUBB2AQ13885 445 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms