RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 ZNF547Q8IVP9 402 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 SIDT2Q8NBJ9 832 aaKnown RBP15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 ZNF398Q8TD17 642 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 CT55Q8WUE5 264 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 KLHL6Q8WZ60 621 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 SLCO2A1Q92959 643 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 RANBP9Q96S59 729 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 TIMM29Q9BSF4 260 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 ASB8Q9H765 288 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 LHX9Q9NQ69 397 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 POT1Q9NUX5 634 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 NLE1Q9NVX2 485 aaPredicted RBP15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 SMOXQ9NWM0 555 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 BFARQ9NZS9 450 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 PCYOX1Q9UHG3 505 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 CRLS1Q9UJA2 301 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 VPS4AQ9UN37 437 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 WDR37Q9Y2I8 494 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 NEU2Q9Y3R4 380 aa15.19■□□□□ 0.02
SNRNP48-203ENST00000634363 IGHV5-51A0A0C4DH38 117 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 MROH6A6NGR9 719 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 GAPDHSO14556 408 aaPredicted RBP15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 GPR39O43194 453 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 UGT1A9O60656 530 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 FOLR1P15328 257 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 VCLP18206 1134 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 NELFEP18615 380 aaKnown RBP15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 UGT1A6P19224 532 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 UGT1A1P22309 533 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 UGT1A4P22310 534 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 ADRA1DP25100 572 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 AKT1P31749 480 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 MC4RP32245 332 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 HALP42357 657 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 MAGEA6P43360 314 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 CAPZBP47756 277 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 ARL4DP49703 201 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 PMS2P54278 862 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 PPP1CAP62136 330 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 DR1Q01658 176 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 TMEM115Q12893 351 aaPredicted RBP15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 TUBB3Q13509 450 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 KCNJ11Q14654 390 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 GPRC6AQ5T6X5 926 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 HIST2H2BCQ6DN03 193 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 PWWP2BQ6NUJ5 590 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 SYDE1Q6ZW31 735 aaPredicted RBP15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 NLRP9Q7RTR0 991 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 PRSS42Q7Z5A4 293 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 EFCAB3Q8N7B9 438 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 DDHD1Q8NEL9 900 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 CPT1BQ92523 772 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 ULK4Q96C45 1275 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 TRIM55Q9BYV6 548 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 IL22Q9GZX6 179 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 ACTL8Q9H568 366 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 AKIRIN1Q9H9L7 192 aaPredicted RBP15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 UGT1A7Q9HAW7 530 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 UGT1A10Q9HAW8 530 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 UGT1A8Q9HAW9 530 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 RARRES3Q9UL19 164 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 PSMD13Q9UNM6 376 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 TCAF1Q9Y4C2 921 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 FLNCQ14315 2725 aa15.18■□□□□ 0.02
SNRNP48-203ENST00000634363 H7C0S8 307 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 KIF2AO00139 706 aaPredicted RBP15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 CCL22O00626 93 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 PDGFAP04085 211 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 UQCRFS1P47985 274 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 CD97P48960 835 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 NPY2RP49146 381 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 CCL11P51671 97 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 RPS18P62269 152 aaKnown RBP15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 PTK6Q13882 451 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 ZRANB3Q5FWF4 1079 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 TSTD2Q5T7W7 516 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 LRRC8BQ6P9F7 803 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 CYB5D1Q6P9G0 228 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 SNX20Q7Z614 316 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 RBM12BQ8IXT5 1001 aaKnown RBP15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 ZNF592Q92610 1267 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 RUFY1Q96T51 708 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 EPHA6Q9UF33 1036 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 TMPRSS11EQ9UL52 423 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 PCDHGA6Q9Y5G7 932 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 RELNP78509 3460 aa15.17■□□□□ 0.02
SNRNP48-203ENST00000634363 TCRBV7S3A2A0A539 114 aa15.16■□□□□ 0.02
SNRNP48-203ENST00000634363 C21orf140B9A014 251 aa15.16■□□□□ 0.02
SNRNP48-203ENST00000634363 TMEM63AO94886 807 aa15.16■□□□□ 0.02
SNRNP48-203ENST00000634363 AGFG2O95081 481 aa15.16■□□□□ 0.02
SNRNP48-203ENST00000634363 TUBB4AP04350 444 aa15.16■□□□□ 0.02
SNRNP48-203ENST00000634363 RALBP11234 206 aa15.16■□□□□ 0.02
SNRNP48-203ENST00000634363 MSH3P20585 1137 aa15.16■□□□□ 0.02
SNRNP48-203ENST00000634363 GNLYP22749 145 aa15.16■□□□□ 0.02
SNRNP48-203ENST00000634363 RPS15P62841 145 aaKnown RBP15.16■□□□□ 0.02
SNRNP48-203ENST00000634363 PRAMEP78395 509 aa15.16■□□□□ 0.02
SNRNP48-203ENST00000634363 XIAPP98170 497 aa15.16■□□□□ 0.02
SNRNP48-203ENST00000634363 CKAP4Q07065 602 aaKnown RBP15.16■□□□□ 0.02
SNRNP48-203ENST00000634363 CHAF1BQ13112 559 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms