RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 HOXC8P31273 242 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 ATP5C1P36542 298 aaKnown RBP13.8□□□□□ -0.2
COL6A1-207ENST00000612273 TGFBR1P36897 503 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 MAGEA10P43363 369 aaPredicted RBP13.8□□□□□ -0.2
COL6A1-207ENST00000612273 RHOAP61586 193 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 CBX3Q13185 183 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 SMN1Q16637 294 aaKnown RBP13.8□□□□□ -0.2
COL6A1-207ENST00000612273 ZNF829Q3KNS6 432 aaPredicted RBP13.8□□□□□ -0.2
COL6A1-207ENST00000612273 PTRH1Q86Y79 214 aaKnown RBP13.8□□□□□ -0.2
COL6A1-207ENST00000612273 ADGRG2Q8IZP9 1017 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 SPARTQ8N0X7 666 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 SCML4Q8N228 414 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 NRBF2Q96F24 287 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 FAIMQ9NVQ4 179 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 ELOVL2Q9NXB9 296 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 TUBA8Q9NY65 449 aaPredicted RBP13.8□□□□□ -0.2
COL6A1-207ENST00000612273 SNX5Q9Y5X3 404 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 IQCA1LA6NCM1 817 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 TMEM247A6NEH6 219 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 DRGXA6NNA5 263 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 CFAP99D6REC4 459 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 ZSCAN9O15535 394 aaPredicted RBP13.8□□□□□ -0.2
COL6A1-207ENST00000612273 MBL2P11226 248 aaPredicted RBP13.8□□□□□ -0.2
COL6A1-207ENST00000612273 AKT1P31749 480 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 OPRL1P41146 370 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 KPNA1P52294 538 aaPredicted RBP13.8□□□□□ -0.2
COL6A1-207ENST00000612273 CYP4F3Q08477 520 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 Q6ZNX1 250 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 SERPINA9Q86WD7 417 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 BPIFB1Q8TDL5 484 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 PDFQ9HBH1 243 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 PDE10AQ9Y233 779 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 ZNF510Q9Y2H8 683 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 SLC45A1Q9Y2W3 748 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 ULK1O75385 1050 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 OAZ2O95190 189 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 GLUD1P00367 558 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 PRR35P0CG20 571 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 CRHBPP24387 322 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 AQP1P29972 269 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 SLC11A2P49281 568 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 AQP6Q13520 282 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 DSC3Q14574 896 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 XAF1Q6GPH4 301 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 PROSER1Q86XN7 944 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 NETO1Q8TDF5 533 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 GLMNQ92990 594 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 FAM120BQ96EK7 910 aaKnown RBP13.79□□□□□ -0.2
COL6A1-207ENST00000612273 C8orf48Q96LL4 319 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 MGME1Q9BQP7 344 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 INPP5KQ9BT40 448 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 BRINP2Q9C0B6 783 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 TNKS2Q9H2K2 1166 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 RAD21L1Q9H4I0 556 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 SLC25A37Q9NYZ2 338 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 ZIM2Q9NZV7 527 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 CXCR6O00574 342 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 PRMT5O14744 637 aaPredicted RBP13.79□□□□□ -0.2
COL6A1-207ENST00000612273 EPOP01588 193 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 PGRP06401 933 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 PSMB9P28065 219 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 CRHR2Q13324 411 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 PDCD4Q53EL6 469 aaKnown RBP13.79□□□□□ -0.2
COL6A1-207ENST00000612273 SUSD1Q6UWL2 747 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 DCDC5Q6ZRR9 648 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 CROCCP3Q8IVE0 287 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 COLGALT2Q8IYK4 626 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 RGL4Q8IZJ4 473 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 COX4I2Q96KJ9 171 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 ZIC5Q96T25 663 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 ELOVL7A1L3X0 281 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 UMPSP11172 480 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 HTR1BP28222 390 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 VBP1P61758 197 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 ZXDBP98169 803 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 OCA2Q04671 838 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 FOXM1Q08050 763 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 DNASE1L3Q13609 305 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 MBTPS1Q14703 1052 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 C6orf141Q5SZD1 244 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 TMEM236Q5W0B7 351 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 PSD4Q8NDX1 1056 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 OR13F1Q8NGS4 319 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 TADA1Q96BN2 335 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 ZNF382Q96SR6 550 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 EBPLQ9BY08 206 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 ADGRE3Q9BY15 652 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 RRAGCQ9HB90 399 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 OPTCQ9UBM4 332 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 DAPK2Q9UIK4 370 aa13.79□□□□□ -0.2
COL6A1-207ENST00000612273 C2orf78A6NCI8 922 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 UNCXA6NJT0 531 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 STX16O14662 325 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 PFDN6O15212 129 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 PRSS23O95084 383 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 CLDN7O95471 211 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 ATF6P18850 670 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 GGT1P19440 569 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 TACR1P25103 407 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 EPHA2P29317 976 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms