RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 UBA6A0AVT1 1052 aaPredicted RBP12.79□□□□□ -0.36
ERBB2-220ENST00000584684 SLC5A10A0PJK1 596 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 PGRMC1O00264 195 aaKnown RBP12.79□□□□□ -0.36
ERBB2-220ENST00000584684 CES2O00748 559 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 ZSCAN12O43309 604 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 OR1I1O60431 355 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 MSL3P1P0C860 447 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 ACADLP28330 430 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 KCNJ1P48048 391 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 TTPAP49638 278 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 KPNA2P52292 529 aaKnown RBP12.79□□□□□ -0.36
ERBB2-220ENST00000584684 PRKAA1Q13131 559 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 KRT33BQ14525 404 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 FASTKD1Q53R41 847 aaKnown RBP12.79□□□□□ -0.36
ERBB2-220ENST00000584684 ARMC6Q6NXE6 501 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 LRRC8BQ6P9F7 803 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 PPP1R3BQ86XI6 285 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 REXO1L1PQ8IX06 675 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 ZNF843Q8N446 348 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 OR52E1Q8NGJ3 308 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 OR6P1Q8NGX9 317 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 OR8K5Q8NH50 307 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 LCN9Q8WX39 176 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 ELMO1Q92556 727 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 TFGQ92734 400 aaPredicted RBP12.79□□□□□ -0.36
ERBB2-220ENST00000584684 MED8Q96G25 268 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 KIFC1Q9BW19 673 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 TSSK1BQ9BXA7 367 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 SRMSQ9H3Y6 488 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 GPN2Q9H9Y4 310 aaPredicted RBP12.79□□□□□ -0.36
ERBB2-220ENST00000584684 CHRAC1Q9NRG0 131 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 LATS2Q9NRM7 1088 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 C1GALT1Q9NS00 363 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 CATSPERZQ9NTU4 200 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 WDR70Q9NW82 654 aa12.79□□□□□ -0.36
ERBB2-220ENST00000584684 ZNF891A8MT65 544 aaPredicted RBP12.78□□□□□ -0.36
ERBB2-220ENST00000584684 BHMG1C9JSJ3 638 aaPredicted RBP12.78□□□□□ -0.36
ERBB2-220ENST00000584684 TERTO14746 1132 aaKnown RBP12.78□□□□□ -0.36
ERBB2-220ENST00000584684 MT-ND3P03897 115 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 PRB1P04280 392 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 FOLR1P15328 257 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 ZNF28P17035 718 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 ARNTP27540 789 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 SESN2P58004 480 aaPredicted RBP12.78□□□□□ -0.36
ERBB2-220ENST00000584684 TUBB4BP68371 445 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 C19orf57Q0VDD7 668 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 TUBB2AQ13885 445 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 COL9A2Q14055 689 aaPredicted RBP12.78□□□□□ -0.36
ERBB2-220ENST00000584684 SEMA3AQ14563 771 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 SYTL3Q4VX76 610 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 TTC27Q6P3X3 843 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 C6orf15Q6UXA7 325 aaPredicted RBP12.78□□□□□ -0.36
ERBB2-220ENST00000584684 LRRC6Q86X45 466 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 TBC1D21Q8IYX1 336 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 SLC22A15Q8IZD6 547 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 OR5K2Q8NHB8 316 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 CATSPER2Q96P56 530 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 FERD3LQ96RJ6 166 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 TUBB2BQ9BVA1 445 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 CARD6Q9BX69 1037 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 KCNF1Q9H3M0 494 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 SYTL2Q9HCH5 934 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 FGF21Q9NSA1 209 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 POLG2Q9UHN1 485 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 ANAPC5Q9UJX4 755 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 RARRES3Q9UL19 164 aa12.78□□□□□ -0.36
ERBB2-220ENST00000584684 LOC101059948A0A1B0GTJ6 334 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 BTN3A1O00481 513 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 PRMT5O14744 637 aaPredicted RBP12.77□□□□□ -0.37
ERBB2-220ENST00000584684 CD3EAPO15446 510 aaKnown RBP12.77□□□□□ -0.37
ERBB2-220ENST00000584684 SPAG6O75602 509 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 EBLN1P0CF75 366 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 MLNP12872 115 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 RPS3P23396 243 aaKnown RBP eCLIP12.77□□□□□ -0.37
ERBB2-220ENST00000584684 SHMT2P34897 504 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 ARL4DP49703 201 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 CRADDP78560 199 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 SARNPP82979 210 aaKnown RBP12.77□□□□□ -0.37
ERBB2-220ENST00000584684 MC1RQ01726 317 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 GPS1Q13098 491 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 KCNAB1Q14722 419 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 TYSND1Q2T9J0 566 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 LINC00303Q3SY05 128 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 DNAJC21Q5F1R6 531 aaKnown RBP12.77□□□□□ -0.37
ERBB2-220ENST00000584684 AMIGO1Q86WK6 493 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 RASGRP3Q8IV61 690 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 OR4E2Q8NGC2 313 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 ACTRT1Q8TDG2 376 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 STAMBPL1Q96FJ0 436 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 HGH1Q9BTY7 390 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 FAM117AQ9C073 453 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 P2RY12Q9H244 342 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 SYBUQ9NX95 663 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 MARCH4Q9P2E8 410 aaPredicted RBP12.77□□□□□ -0.37
ERBB2-220ENST00000584684 SOX13Q9UN79 622 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 ICKQ9UPZ9 632 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 CDYLQ9Y232 598 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 ASF1AQ9Y294 204 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 NEU2Q9Y3R4 380 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 PCDHGA6Q9Y5G7 932 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms